RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 ARG2P78540 354 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 WDR74Q6RFH5 385 aaPredicted RBP11.7□□□□□ -0.54
COL6A2-204ENST00000409416 SLC22A25Q6T423 547 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 GJC3Q8NFK1 279 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 OR9K2Q8NGE7 335 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 OR51H1Q8NH63 302 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 FBXO17Q96EF6 278 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 NAA11Q9BSU3 229 aaPredicted RBP11.7□□□□□ -0.54
COL6A2-204ENST00000409416 FAM234AQ9H0X4 552 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 BARX1Q9HBU1 254 aaPredicted RBP11.7□□□□□ -0.54
COL6A2-204ENST00000409416 MIOXQ9UGB7 285 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 KCNS2Q9ULS6 477 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 TMEM14DPA8MWL7 114 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 GEMIN2O14893 280 aaKnown RBP11.7□□□□□ -0.54
COL6A2-204ENST00000409416 SOX15O60248 233 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 SFT2D2O95562 160 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 GPM6AP51674 278 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 IZUMO4Q1ZYL8 232 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 FAM76BQ5HYJ3 339 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 FBXW12Q6X9E4 464 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 SULF2Q8IWU5 870 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 ZNF441Q8N8Z8 693 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 FGFBP3Q8TAT2 258 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 RBMXL1Q96E39 390 aaKnown RBP11.7□□□□□ -0.54
COL6A2-204ENST00000409416 RNF126Q9BV68 326 aa11.7□□□□□ -0.54
COL6A2-204ENST00000409416 NOTCH3Q9UM47 2321 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 LOC390937A0A1W2PQ73 354 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 PPT1P50897 306 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 UBE2V2Q15819 145 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 OR2A2Q6IF42 318 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 OR11L1Q8NGX0 322 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 ASB13Q8WXK3 278 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 SGK3Q96BR1 496 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 NUP210LQ5VU65 1888 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 DMXL1Q9Y485 3027 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 SCGNO76038 276 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 TFF1P04155 84 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 SUCLG1P53597 346 aaKnown RBP11.69□□□□□ -0.54
COL6A2-204ENST00000409416 SPEM2Q0P670 501 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 USF2Q15853 346 aaPredicted RBP11.69□□□□□ -0.54
COL6A2-204ENST00000409416 TMEM230Q96A57 120 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 INTS12Q96CB8 462 aaKnown RBP11.69□□□□□ -0.54
COL6A2-204ENST00000409416 HIST1H2AAQ96QV6 131 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 FAM117AQ9C073 453 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 UCK1Q9HA47 277 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 TAF9BQ9HBM6 251 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 DCAF16Q9NXF7 216 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 SLC2A8Q9NY64 477 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 CACNA1AO00555 2505 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 HSD17B6O14756 317 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 IL2RAP01589 272 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 HPNP05981 417 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 GRPP07492 148 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 MELTFP08582 738 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 PGA4P0DJD7 388 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 PGA3P0DJD8 388 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 ADCYAP1P18509 176 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 PTGFRP43088 359 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 HERV-K104P61576 105 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 SNRPEP62304 92 aaKnown RBP11.69□□□□□ -0.54
COL6A2-204ENST00000409416 PDZK1IP1Q13113 114 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 TUSC5Q8IXB3 177 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 NFAM1Q8NET5 270 aaPredicted RBP11.69□□□□□ -0.54
COL6A2-204ENST00000409416 CT55Q8WUE5 264 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 PTX4Q96A99 478 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 PHYHIPLQ96FC7 376 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 ZC3H10Q96K80 434 aaKnown RBP11.69□□□□□ -0.54
COL6A2-204ENST00000409416 IL36RNQ9UBH0 155 aa11.69□□□□□ -0.54
COL6A2-204ENST00000409416 IGKV1-9A0A0C4DH69 117 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 TNFSF15O95150 251 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 UMODP07911 640 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 CD63P08962 238 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 MPLP40238 635 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 S100A12P80511 92 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 QRFPP83859 136 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 SRSF6Q13247 344 aaKnown RBP11.68□□□□□ -0.54
COL6A2-204ENST00000409416 DOK3Q7L591 496 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 MRPL21Q7Z2W9 205 aaKnown RBP11.68□□□□□ -0.54
COL6A2-204ENST00000409416 C1orf210Q8IVY1 113 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 EIF4E3Q8N5X7 224 aaKnown RBP11.68□□□□□ -0.54
COL6A2-204ENST00000409416 OIT3Q8WWZ8 545 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 SCGB3A2Q96PL1 93 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 PIGQQ9BRB3 760 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 RHOFQ9HBH0 211 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 GPR132Q9UNW8 380 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 ST3GAL6Q9Y274 331 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 RCL1Q9Y2P8 373 aaKnown RBP11.68□□□□□ -0.54
COL6A2-204ENST00000409416 IGKV1D-8A0A087WSZ0 117 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 K7EPK0 472 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 PHF1O43189 567 aaPredicted RBP11.68□□□□□ -0.54
COL6A2-204ENST00000409416 GSTP1P09211 210 aaKnown RBP11.68□□□□□ -0.54
COL6A2-204ENST00000409416 IDH3GP51553 393 aaPredicted RBP11.68□□□□□ -0.54
COL6A2-204ENST00000409416 ZP4Q12836 540 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 PMS2CLQ68D20 193 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 ETV3LQ6ZN32 361 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 DTX1Q86Y01 620 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 FAM71E2Q8N5Q1 922 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 CD300LFQ8TDQ1 290 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 DNASE2BQ8WZ79 361 aa11.68□□□□□ -0.54
COL6A2-204ENST00000409416 TGIF2Q9GZN2 237 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms