RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 ZFAND5O76080 213 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 NPBWR2P48146 333 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 ZNF154Q13106 437 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 PRSS54Q6PEW0 395 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 OR10D4PQ8NGN7 298 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 MARS2Q96GW9 593 aaKnown RBP7.29□□□□□ -1.24
SNX13-201ENST00000409076 POM121Q96HA1 1249 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 TMPRSS5Q9H3S3 457 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 SMCO3A2RU48 225 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 NKX2-6A6NCS4 301 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 IGKV3-11P04433 115 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 ACAA1P09110 424 aaPredicted RBP7.29□□□□□ -1.24
SNX13-201ENST00000409076 SNRPCP09234 159 aaKnown RBP7.29□□□□□ -1.24
SNX13-201ENST00000409076 GDF1P27539 372 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 GPM6AP51674 278 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 CCL20P78556 96 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 PMP22Q01453 160 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 HIST2H3PS2Q5TEC6 136 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 CYB5R2Q6BCY4 276 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 CDPF1Q6NVV7 123 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 ANKRD37Q7Z713 158 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 THNSL2Q86YJ6 484 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 SLC43A2Q8N370 569 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 LRFN5Q96NI6 719 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 KCNK17Q96T54 332 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 RTBDNQ9BSG5 229 aaPredicted RBP7.29□□□□□ -1.24
SNX13-201ENST00000409076 MMP26Q9NRE1 261 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 OBP2AQ9NY56 170 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 ZFHX4Q86UP3 3567 aa7.29□□□□□ -1.24
SNX13-201ENST00000409076 ABCA4P78363 2273 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.28□□□□□ -1.24
SNX13-201ENST00000409076 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.28□□□□□ -1.24
SNX13-201ENST00000409076 WDR1O75083 606 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 PIAS2O75928 621 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 APOC1P02654 83 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 ZNF708P17019 499 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 ZNF32P17041 273 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 HAAOP46952 286 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 ZNF84P51523 738 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 SUPT4H1P63272 117 aaKnown RBP7.28□□□□□ -1.24
SNX13-201ENST00000409076 BATFQ16520 125 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 CEACAM16Q2WEN9 425 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 CXorf66Q5JRM2 361 aaPredicted RBP7.28□□□□□ -1.24
SNX13-201ENST00000409076 AKR1C8PQ5T2L2 129 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 FNDC7Q5VTL7 733 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 LINC00469Q8N7U9 141 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 SCGB3A2Q96PL1 93 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 TMEM204Q9BSN7 226 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 METTL9Q9H1A3 318 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 SLCO5A1Q9H2Y9 848 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 PLK3Q9H4B4 646 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 LRFN1Q9P244 771 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 GPR132Q9UNW8 380 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 GAB2Q9UQC2 676 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 ADAM20O43506 726 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 MBPP02686 304 aaPredicted RBP7.28□□□□□ -1.24
SNX13-201ENST00000409076 HKR1P10072 659 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 ACKR3P25106 362 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 CD27P26842 260 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 DCDP81605 110 aaKnown RBP7.28□□□□□ -1.24
SNX13-201ENST00000409076 MPPED2Q15777 294 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 MPV17LQ2QL34 196 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 TEX30Q5JUR7 227 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 WDR25Q64LD2 544 aaPredicted RBP7.28□□□□□ -1.24
SNX13-201ENST00000409076 ZNF880Q6PDB4 577 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 AAED1Q7RTV5 226 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 TMPRSS7Q7RTY8 843 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 HOGA1Q86XE5 327 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 SLC25A45Q8N413 288 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 SLC30A7Q8NEW0 376 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 OR5C1Q8NGR4 320 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 ABHD3Q8WU67 409 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 CPNE4Q96A23 557 aaPredicted RBP7.28□□□□□ -1.24
SNX13-201ENST00000409076 RPUSD4Q96CM3 377 aaKnown RBP7.28□□□□□ -1.24
SNX13-201ENST00000409076 CMTM3Q96MX0 182 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 RASL10BQ96S79 203 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 ZNF576Q9H609 170 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 FAM212BQ9NTI7 297 aaPredicted RBP7.28□□□□□ -1.24
SNX13-201ENST00000409076 LUZP4Q9P127 313 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 WIF1Q9Y5W5 379 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 TUSC2O75896 110 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 FABP4P15090 132 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 MSR1P21757 451 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 AADACP22760 399 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 PTAFRP25105 342 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 RPL23AP62750 156 aaKnown RBP7.28□□□□□ -1.24
SNX13-201ENST00000409076 PABPC1L2AQ5JQF8 200 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 GFI1BQ5VTD9 330 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 LPCAT3Q6P1A2 487 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 DOK3Q7L591 496 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 LIPHQ8WWY8 451 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 HINT2Q9BX68 163 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 C19orf12Q9NSK7 152 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 MYOTQ9UBF9 498 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 FZR1Q9UM11 496 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 MMACHCQ9Y4U1 282 aa7.28□□□□□ -1.24
SNX13-201ENST00000409076 MED13Q9UHV7 2174 aa7.27□□□□□ -1.24
SNX13-201ENST00000409076 A0A1B0GTI1 187 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 PRR19A6NJB7 356 aa7.27□□□□□ -1.25
SNX13-201ENST00000409076 LMO7DNF2Z398 122 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms