RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 FAM90A5PA8MXJ8 464 aa11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 FAM90A23PA8MXZ1 464 aa11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 MLNRO43193 412 aa11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 NDUFB6O95139 128 aa11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 FAM90A15PP0C7V4 464 aa11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 FAM90A13PP0C7W8 464 aa11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 FAM90A14PP0C7W9 464 aa11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 FAM90A24PP0C7X0 464 aa11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 ZNF735P0CB33 412 aa11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 PDCD1Q15116 288 aa11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 OR52W1Q6IF63 320 aa11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 TMEM108Q6UXF1 575 aa11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 Q6ZR03 302 aa11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 WFDC8Q8IUA0 241 aa11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 SPERTQ8NA61 448 aa11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 SCCPDHQ8NBX0 429 aa11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 OR13G1Q8NGZ3 307 aa11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 RADILQ96JH8 1075 aa11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 C20orf85Q9H1P6 137 aa11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 NPDC1Q9NQX5 325 aaPredicted RBP11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 DUSP13Q9UII6 198 aa11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 FLVCR2Q9UPI3 526 aa11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 CADP27708 2225 aa11.32□□□□□ -0.6
CEACAM1-206ENST00000403136 A0A1B0GWJ7 208 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 ATP6V1G2-DDX39BF2Z307 99 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 PDCD6O75340 191 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 RHBDL1O75783 438 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 IGHV3-13P01766 116 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 AMY2AP04746 511 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 HNRNPCP07910 306 aaKnown RBP eCLIP11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 PPP3CBP16298 524 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 FUT3P21217 361 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 PTAFRP25105 342 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 CHRNB4P30926 498 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 ZNF154Q13106 437 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 MEF2DQ14814 521 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 DAZAP2Q15038 168 aaPredicted RBP11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 RNASE10Q5GAN6 216 aaKnown RBP11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 LRP11Q86VZ4 500 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 HOGA1Q86XE5 327 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 BPIFB2Q8N4F0 458 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 OR4K15Q8NH41 348 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 TMEM171Q8WVE6 324 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 HPS1Q92902 700 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 EMG1Q92979 244 aaKnown RBP11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 ZNF488Q96MN9 340 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 SULT4A1Q9BR01 284 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 ST6GALNAC5Q9BVH7 336 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 CXXC4Q9H2H0 198 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 PLK3Q9H4B4 646 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 RHOFQ9HBH0 211 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 A0A0A6YYJ9 748 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 DPRXA6NFQ7 191 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 DISC1C4P0D8 188 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 CDIPTO14735 213 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 PEX14O75381 377 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 OR7C1O76099 320 aaPredicted RBP11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 GRPP07492 148 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 TBPP20226 339 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 PMELP40967 661 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 ASCL1P50553 236 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 RPS23P62266 143 aaKnown RBP11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 CD300CQ08708 224 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 RBMS2Q15434 407 aaKnown RBP11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 BRICD5Q6PL45 260 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 FAM58AQ8N1B3 248 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 SNAPC3Q92966 411 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 WFIKKN1Q96NZ8 548 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 SLC6A7Q99884 636 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 MSL2Q9HCI7 577 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 COQ3Q9NZJ6 369 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 AK3Q9UIJ7 227 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 SCP2D1Q9UJQ7 156 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 PLEKHA6Q9Y2H5 1048 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 POLDIP2Q9Y2S7 368 aa11.31□□□□□ -0.6
CEACAM1-206ENST00000403136 PKD1L2Q7Z442 2459 aa11.3□□□□□ -0.6
CEACAM1-206ENST00000403136 C7orf66A4D0T2 115 aa11.3□□□□□ -0.6
CEACAM1-206ENST00000403136 ARPC1BO15143 372 aaKnown RBP11.3□□□□□ -0.6
CEACAM1-206ENST00000403136 TPD52L2O43399 206 aaKnown RBP11.3□□□□□ -0.6
CEACAM1-206ENST00000403136 ACAA1P09110 424 aaPredicted RBP11.3□□□□□ -0.6
CEACAM1-206ENST00000403136 TRAPPC2P0DI81 140 aa11.3□□□□□ -0.6
CEACAM1-206ENST00000403136 TRAPPC2BP0DI82 140 aa11.3□□□□□ -0.6
CEACAM1-206ENST00000403136 PRKACAP17612 351 aa11.3□□□□□ -0.6
CEACAM1-206ENST00000403136 HRH1P35367 487 aa11.3□□□□□ -0.6
CEACAM1-206ENST00000403136 SNU13P55769 128 aaKnown RBP11.3□□□□□ -0.6
CEACAM1-206ENST00000403136 MAB21L1Q13394 359 aa11.3□□□□□ -0.6
CEACAM1-206ENST00000403136 MPV17LQ2QL34 196 aa11.3□□□□□ -0.6
CEACAM1-206ENST00000403136 ATAD3CQ5T2N8 411 aa11.3□□□□□ -0.6
CEACAM1-206ENST00000403136 VHLLQ6RSH7 139 aa11.3□□□□□ -0.6
CEACAM1-206ENST00000403136 AKAP14Q86UN6 197 aa11.3□□□□□ -0.6
CEACAM1-206ENST00000403136 LILRB4Q8NHJ6 448 aa11.3□□□□□ -0.6
CEACAM1-206ENST00000403136 CMSS1Q9BQ75 279 aaKnown RBP11.3□□□□□ -0.6
CEACAM1-206ENST00000403136 GINS4Q9BRT9 223 aa11.3□□□□□ -0.6
CEACAM1-206ENST00000403136 GHITMQ9H3K2 345 aa11.3□□□□□ -0.6
CEACAM1-206ENST00000403136 ZNF230Q9UIE0 474 aaPredicted RBP11.3□□□□□ -0.6
CEACAM1-206ENST00000403136 IGLV3-9A0A075B6K5 115 aa11.29□□□□□ -0.6
CEACAM1-206ENST00000403136 F5H5P2 479 aa11.29□□□□□ -0.6
CEACAM1-206ENST00000403136 H3BUI4 141 aa11.29□□□□□ -0.6
CEACAM1-206ENST00000403136 PYCARD-AS1I3L0S3 204 aa11.29□□□□□ -0.6
CEACAM1-206ENST00000403136 PMP2P02689 132 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms