RNA–Protein interactions for RNA: ENST00000398153.6

HDDC2-202, Transcript of HD domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDDC2, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-202ENST00000398153 Q499Y3 187 aa11.81□□□□□ -0.52
HDDC2-202ENST00000398153 SPIN3Q5JUX0 258 aa11.81□□□□□ -0.52
HDDC2-202ENST00000398153 C9orf139Q6ZV77 190 aa11.81□□□□□ -0.52
HDDC2-202ENST00000398153 CMTM4Q8IZR5 234 aa11.81□□□□□ -0.52
HDDC2-202ENST00000398153 TMEM158Q8WZ71 300 aa11.81□□□□□ -0.52
HDDC2-202ENST00000398153 RGP1Q92546 391 aaPredicted RBP11.81□□□□□ -0.52
HDDC2-202ENST00000398153 ZNF488Q96MN9 340 aa11.81□□□□□ -0.52
HDDC2-202ENST00000398153 WDFY2Q96P53 400 aa11.81□□□□□ -0.52
HDDC2-202ENST00000398153 SUCNR1Q9BXA5 334 aa11.81□□□□□ -0.52
HDDC2-202ENST00000398153 GLS2Q9UI32 602 aa11.81□□□□□ -0.52
HDDC2-202ENST00000398153 BLOC1S6Q9UL45 172 aa11.81□□□□□ -0.52
HDDC2-202ENST00000398153 SIRT4Q9Y6E7 314 aaPredicted RBP11.81□□□□□ -0.52
HDDC2-202ENST00000398153 TRBV5-5A0A0J9YX44 114 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 A0A1W2PPH5 198 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 GPX5O75715 221 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 TOX4O94842 621 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 PLATP00750 562 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 HCKP08631 526 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 MMP9P14780 707 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 BMXP51813 675 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 FGF12P61328 243 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 GPR50Q13585 617 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 ZNF146Q15072 292 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 TUSC1Q2TAM9 212 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 KLF17Q5JT82 389 aaPredicted RBP11.8□□□□□ -0.52
HDDC2-202ENST00000398153 RBM48Q5RL73 367 aaKnown RBP11.8□□□□□ -0.52
HDDC2-202ENST00000398153 FAM58AQ8N1B3 248 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 BPIFB2Q8N4F0 458 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 MS4A15Q8N5U1 240 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 CD177Q8N6Q3 437 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 ZNRF1Q8ND25 227 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 OR5D13Q8NGL4 314 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 ZFAND2BQ8WV99 257 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 SLAMF9Q96A28 289 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 PGLYRP3Q96LB9 341 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 Q9H521 79 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 OCEL1Q9H607 264 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 TMEM138Q9NPI0 162 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 CKLFQ9UBR5 152 aa11.8□□□□□ -0.52
HDDC2-202ENST00000398153 A0A1B0GW55 424 aa11.79□□□□□ -0.52
HDDC2-202ENST00000398153 K7N7A8 449 aa11.79□□□□□ -0.52
HDDC2-202ENST00000398153 M0R1W7 72 aa11.79□□□□□ -0.52
HDDC2-202ENST00000398153 KDM4BO94953 1096 aa11.79□□□□□ -0.52
HDDC2-202ENST00000398153 DUX4L2P0CJ85 424 aa11.79□□□□□ -0.52
HDDC2-202ENST00000398153 DUX4L3P0CJ86 424 aa11.79□□□□□ -0.52
HDDC2-202ENST00000398153 DUX4L4P0CJ87 422 aa11.79□□□□□ -0.52
HDDC2-202ENST00000398153 DUX4L5P0CJ88 424 aa11.79□□□□□ -0.52
HDDC2-202ENST00000398153 DUX4L6P0CJ89 424 aa11.79□□□□□ -0.52
HDDC2-202ENST00000398153 DUX4L7P0CJ90 424 aa11.79□□□□□ -0.52
HDDC2-202ENST00000398153 NDUFB7P17568 137 aa11.79□□□□□ -0.52
HDDC2-202ENST00000398153 CELP19835 753 aa11.79□□□□□ -0.52
HDDC2-202ENST00000398153 CRHBPP24387 322 aa11.79□□□□□ -0.52
HDDC2-202ENST00000398153 MAPK3P27361 379 aaPredicted RBP11.79□□□□□ -0.52
HDDC2-202ENST00000398153 POU3F4P49335 361 aa11.79□□□□□ -0.52
HDDC2-202ENST00000398153 PPP3R1P63098 170 aa11.79□□□□□ -0.52
HDDC2-202ENST00000398153 SPHARQ15513 63 aa11.79□□□□□ -0.52
HDDC2-202ENST00000398153 GPR157Q5UAW9 335 aa11.79□□□□□ -0.52
HDDC2-202ENST00000398153 DUX4L9Q6RFH8 374 aaPredicted RBP11.79□□□□□ -0.52
HDDC2-202ENST00000398153 METAP1DQ6UB28 335 aaPredicted RBP11.79□□□□□ -0.52
HDDC2-202ENST00000398153 TMEM185AQ8NFB2 350 aa11.79□□□□□ -0.52
HDDC2-202ENST00000398153 PXT1Q8NFP0 134 aa11.79□□□□□ -0.52
HDDC2-202ENST00000398153 EMG1Q92979 244 aaKnown RBP11.79□□□□□ -0.52
HDDC2-202ENST00000398153 ZNF184Q99676 751 aaPredicted RBP11.79□□□□□ -0.52
HDDC2-202ENST00000398153 SIRPDQ9H106 197 aa11.79□□□□□ -0.52
HDDC2-202ENST00000398153 DUX4Q9UBX2 424 aa11.79□□□□□ -0.52
HDDC2-202ENST00000398153 ATRQ13535 2644 aa11.79□□□□□ -0.52
HDDC2-202ENST00000398153 FBN1P35555 2871 aaKnown RBP11.78□□□□□ -0.52
HDDC2-202ENST00000398153 RGS10O43665 173 aa11.78□□□□□ -0.52
HDDC2-202ENST00000398153 TK1P04183 234 aa11.78□□□□□ -0.52
HDDC2-202ENST00000398153 SOX2P48431 317 aa11.78□□□□□ -0.52
HDDC2-202ENST00000398153 HILS1P60008 231 aa11.78□□□□□ -0.52
HDDC2-202ENST00000398153 ZP1P60852 638 aa11.78□□□□□ -0.52
HDDC2-202ENST00000398153 RPS11P62280 158 aaKnown RBP eCLIP11.78□□□□□ -0.52
HDDC2-202ENST00000398153 ARF6P62330 175 aa11.78□□□□□ -0.52
HDDC2-202ENST00000398153 BLMHQ13867 455 aa11.78□□□□□ -0.52
HDDC2-202ENST00000398153 IRF3Q14653 427 aa11.78□□□□□ -0.52
HDDC2-202ENST00000398153 RBMS3Q6XE24 437 aaKnown RBP11.78□□□□□ -0.52
HDDC2-202ENST00000398153 PRSS48Q7RTY5 328 aa11.78□□□□□ -0.52
HDDC2-202ENST00000398153 CDH26Q8IXH8 852 aa11.78□□□□□ -0.52
HDDC2-202ENST00000398153 H1FXQ92522 213 aaKnown RBP11.78□□□□□ -0.52
HDDC2-202ENST00000398153 PCGF1Q9BSM1 259 aa11.78□□□□□ -0.52
HDDC2-202ENST00000398153 MS4A7Q9GZW8 240 aaPredicted RBP11.78□□□□□ -0.52
HDDC2-202ENST00000398153 UNKLQ9H9P5 680 aaKnown RBP11.78□□□□□ -0.52
HDDC2-202ENST00000398153 HMG20AQ9NP66 347 aa11.78□□□□□ -0.52
HDDC2-202ENST00000398153 ISYNA1Q9NPH2 558 aa11.78□□□□□ -0.52
HDDC2-202ENST00000398153 OR14J1Q9UGF5 321 aa11.78□□□□□ -0.52
HDDC2-202ENST00000398153 FOXJ3Q9UPW0 622 aa11.78□□□□□ -0.52
HDDC2-202ENST00000398153 hCG_1809904A0A1W2PP81 198 aa11.77□□□□□ -0.53
HDDC2-202ENST00000398153 A0A1W2PPE2 198 aa11.77□□□□□ -0.53
HDDC2-202ENST00000398153 A0A1W2PR64 198 aa11.77□□□□□ -0.53
HDDC2-202ENST00000398153 A0A1W2PRV1 198 aa11.77□□□□□ -0.53
HDDC2-202ENST00000398153 F8VVB4 439 aa11.77□□□□□ -0.53
HDDC2-202ENST00000398153 F8VWA3 439 aa11.77□□□□□ -0.53
HDDC2-202ENST00000398153 SH2D1BO14796 132 aa11.77□□□□□ -0.53
HDDC2-202ENST00000398153 DENRO43583 198 aaKnown RBP11.77□□□□□ -0.53
HDDC2-202ENST00000398153 SPRY1O43609 319 aaPredicted RBP11.77□□□□□ -0.53
HDDC2-202ENST00000398153 MRPS14O60783 128 aaKnown RBP11.77□□□□□ -0.53
HDDC2-202ENST00000398153 TMEM225BP0DP42 221 aa11.77□□□□□ -0.53
HDDC2-202ENST00000398153 SELLP14151 372 aa11.77□□□□□ -0.53
HDDC2-202ENST00000398153 IGFBP3P17936 291 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms