RNA–Protein interactions for RNA: ENST00000397404.5

TSPAN4-204, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-204ENST00000397404 ASAH1Q13510 395 aa16.15■□□□□ 0.18
TSPAN4-204ENST00000397404 DYRK1AQ13627 763 aa16.15■□□□□ 0.18
TSPAN4-204ENST00000397404 STEAP3Q658P3 488 aa16.15■□□□□ 0.18
TSPAN4-204ENST00000397404 SNX29P2Q8IUI4 249 aa16.15■□□□□ 0.18
TSPAN4-204ENST00000397404 FAM58AQ8N1B3 248 aa16.15■□□□□ 0.18
TSPAN4-204ENST00000397404 FBXL14Q8N1E6 418 aa16.15■□□□□ 0.18
TSPAN4-204ENST00000397404 HPS1Q92902 700 aa16.15■□□□□ 0.18
TSPAN4-204ENST00000397404 DVL3Q92997 716 aaPredicted RBP16.15■□□□□ 0.18
TSPAN4-204ENST00000397404 NEDD4LQ96PU5 975 aa16.15■□□□□ 0.18
TSPAN4-204ENST00000397404 NKX3-1Q99801 234 aaPredicted RBP16.15■□□□□ 0.18
TSPAN4-204ENST00000397404 SPOCK3Q9BQ16 436 aa16.15■□□□□ 0.18
TSPAN4-204ENST00000397404 NRIP2Q9BQI9 281 aa16.15■□□□□ 0.18
TSPAN4-204ENST00000397404 KCNK15Q9H427 330 aa16.15■□□□□ 0.18
TSPAN4-204ENST00000397404 BANF2Q9H503 90 aa16.15■□□□□ 0.18
TSPAN4-204ENST00000397404 DOPEY1Q5JWR5 2465 aa16.14■□□□□ 0.17
TSPAN4-204ENST00000397404 ZNF462Q96JM2 2506 aa16.14■□□□□ 0.17
TSPAN4-204ENST00000397404 ADGRG4Q8IZF6 3080 aa16.14■□□□□ 0.17
TSPAN4-204ENST00000397404 ZSCAN5BA6NJL1 495 aa16.14■□□□□ 0.17
TSPAN4-204ENST00000397404 FOXI3A8MTJ6 420 aaPredicted RBP16.14■□□□□ 0.17
TSPAN4-204ENST00000397404 F5H5P2 479 aa16.14■□□□□ 0.17
TSPAN4-204ENST00000397404 H7C417 338 aa16.14■□□□□ 0.17
TSPAN4-204ENST00000397404 CDIPTO14735 213 aa16.14■□□□□ 0.17
TSPAN4-204ENST00000397404 LOXP28300 417 aaPredicted RBP16.14■□□□□ 0.17
TSPAN4-204ENST00000397404 BLVRBP30043 206 aaPredicted RBP16.14■□□□□ 0.17
TSPAN4-204ENST00000397404 BAK1Q16611 211 aa16.14■□□□□ 0.17
TSPAN4-204ENST00000397404 CDNFQ49AH0 187 aa16.14■□□□□ 0.17
TSPAN4-204ENST00000397404 CHST4Q8NCG5 386 aa16.14■□□□□ 0.17
TSPAN4-204ENST00000397404 Q8TCH9 128 aa16.14■□□□□ 0.17
TSPAN4-204ENST00000397404 YIPF5Q969M3 257 aa16.14■□□□□ 0.17
TSPAN4-204ENST00000397404 TRIM63Q969Q1 353 aa16.14■□□□□ 0.17
TSPAN4-204ENST00000397404 SLAMF9Q96A28 289 aa16.14■□□□□ 0.17
TSPAN4-204ENST00000397404 PIK3IP1Q96FE7 263 aa16.14■□□□□ 0.17
TSPAN4-204ENST00000397404 MEGF10Q96KG7 1140 aa16.14■□□□□ 0.17
TSPAN4-204ENST00000397404 MTFP1Q9UDX5 166 aa16.14■□□□□ 0.17
TSPAN4-204ENST00000397404 H0YL77 283 aa16.13■□□□□ 0.17
TSPAN4-204ENST00000397404 GRPP07492 148 aa16.13■□□□□ 0.17
TSPAN4-204ENST00000397404 CSF1P09603 554 aa16.13■□□□□ 0.17
TSPAN4-204ENST00000397404 BCL3P20749 454 aa16.13■□□□□ 0.17
TSPAN4-204ENST00000397404 FAUP35544 74 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-204ENST00000397404 SNRPD2P62316 118 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-204ENST00000397404 ZNF146Q15072 292 aa16.13■□□□□ 0.17
TSPAN4-204ENST00000397404 SMIM21Q3B7S5 101 aa16.13■□□□□ 0.17
TSPAN4-204ENST00000397404 MZT2BQ6NZ67 158 aa16.13■□□□□ 0.17
TSPAN4-204ENST00000397404 WDR86Q86TI4 376 aa16.13■□□□□ 0.17
TSPAN4-204ENST00000397404 TOMM5Q8N4H5 51 aa16.13■□□□□ 0.17
TSPAN4-204ENST00000397404 OR10K1Q8NGX5 313 aa16.13■□□□□ 0.17
TSPAN4-204ENST00000397404 GPX8Q8TED1 209 aa16.13■□□□□ 0.17
TSPAN4-204ENST00000397404 GTF3AQ92664 365 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-204ENST00000397404 FBXW5Q969U6 566 aa16.13■□□□□ 0.17
TSPAN4-204ENST00000397404 OR2V2Q96R30 315 aa16.13■□□□□ 0.17
TSPAN4-204ENST00000397404 HES4Q9HCC6 221 aa16.13■□□□□ 0.17
TSPAN4-204ENST00000397404 PLEKHJ1Q9NW61 149 aa16.13■□□□□ 0.17
TSPAN4-204ENST00000397404 MYEF2Q9P2K5 600 aaKnown RBP16.13■□□□□ 0.17
TSPAN4-204ENST00000397404 NPTNQ9Y639 398 aa16.13■□□□□ 0.17
TSPAN4-204ENST00000397404 RELNP78509 3460 aa16.13■□□□□ 0.17
TSPAN4-204ENST00000397404 MYO18BQ8IUG5 2567 aa16.13■□□□□ 0.17
TSPAN4-204ENST00000397404 A0A1W2PP11 408 aa16.12■□□□□ 0.17
TSPAN4-204ENST00000397404 A0A1W2PQ09 198 aa16.12■□□□□ 0.17
TSPAN4-204ENST00000397404 NAP1L6A6NFF2 107 aa16.12■□□□□ 0.17
TSPAN4-204ENST00000397404 A6NLC8 198 aa16.12■□□□□ 0.17
TSPAN4-204ENST00000397404 MFNGO00587 321 aa16.12■□□□□ 0.17
TSPAN4-204ENST00000397404 SYNGR1O43759 233 aa16.12■□□□□ 0.17
TSPAN4-204ENST00000397404 PDCD6O75340 191 aa16.12■□□□□ 0.17
TSPAN4-204ENST00000397404 IGHV1-46P01743 117 aa16.12■□□□□ 0.17
TSPAN4-204ENST00000397404 TBPP20226 339 aa16.12■□□□□ 0.17
TSPAN4-204ENST00000397404 FUT3P21217 361 aa16.12■□□□□ 0.17
TSPAN4-204ENST00000397404 TNFAIP6P98066 277 aaPredicted RBP16.12■□□□□ 0.17
TSPAN4-204ENST00000397404 BIVMQ86UB2 503 aa16.12■□□□□ 0.17
TSPAN4-204ENST00000397404 MUC15Q8N387 334 aa16.12■□□□□ 0.17
TSPAN4-204ENST00000397404 OR11L1Q8NGX0 322 aa16.12■□□□□ 0.17
TSPAN4-204ENST00000397404 EMG1Q92979 244 aaKnown RBP16.12■□□□□ 0.17
TSPAN4-204ENST00000397404 NICN1Q9BSH3 213 aa16.12■□□□□ 0.17
TSPAN4-204ENST00000397404 LRRC30A6NM36 301 aa16.11■□□□□ 0.17
TSPAN4-204ENST00000397404 NXPH2O95156 264 aa16.11■□□□□ 0.17
TSPAN4-204ENST00000397404 PPOXP50336 477 aa16.11■□□□□ 0.17
TSPAN4-204ENST00000397404 GNG2P59768 71 aa16.11■□□□□ 0.17
TSPAN4-204ENST00000397404 MRPS15P82914 257 aaKnown RBP16.11■□□□□ 0.17
TSPAN4-204ENST00000397404 RBM39Q14498 530 aaKnown RBP16.11■□□□□ 0.17
TSPAN4-204ENST00000397404 AGAP6Q5VW22 663 aa16.11■□□□□ 0.17
TSPAN4-204ENST00000397404 WDR82Q6UXN9 313 aa16.11■□□□□ 0.17
TSPAN4-204ENST00000397404 IZUMO1Q8IYV9 350 aa16.11■□□□□ 0.17
TSPAN4-204ENST00000397404 ST8SIA4Q92187 359 aa16.11■□□□□ 0.17
TSPAN4-204ENST00000397404 COX4I2Q96KJ9 171 aa16.11■□□□□ 0.17
TSPAN4-204ENST00000397404 CHST6Q9GZX3 395 aa16.11■□□□□ 0.17
TSPAN4-204ENST00000397404 RIMS4Q9H426 269 aaPredicted RBP16.11■□□□□ 0.17
TSPAN4-204ENST00000397404 DYNLRB1Q9NP97 96 aa16.11■□□□□ 0.17
TSPAN4-204ENST00000397404 RCC2Q9P258 522 aaKnown RBP16.11■□□□□ 0.17
TSPAN4-204ENST00000397404 A0A0A6YYD4 124 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 H7C1Q1 480 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 GEMIN2O14893 280 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 SOCS1O15524 211 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 SIAH2O43255 324 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 SPRY3O43610 288 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 PRKACAP17612 351 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 GABRR1P24046 479 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 CHATP28329 748 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 RCVRNP35243 200 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 GDNFP39905 211 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 NPBWR2P48146 333 aa16.1■□□□□ 0.17
TSPAN4-204ENST00000397404 TMEM50BP56557 158 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms