RNA–Protein interactions for RNA: ENST00000397105.7

SEC13-207, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 883 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-207ENST00000397105 F8VWA3 439 aa17.34■□□□□ 0.37
SEC13-207ENST00000397105 SPRY1O43609 319 aaPredicted RBP17.34■□□□□ 0.37
SEC13-207ENST00000397105 FCN3O75636 299 aa17.34■□□□□ 0.37
SEC13-207ENST00000397105 KNG1P01042 644 aa17.34■□□□□ 0.37
SEC13-207ENST00000397105 IFNA2P01563 188 aa17.34■□□□□ 0.37
SEC13-207ENST00000397105 TFF1P04155 84 aa17.34■□□□□ 0.37
SEC13-207ENST00000397105 ALDOBP05062 364 aa17.34■□□□□ 0.37
SEC13-207ENST00000397105 GPR50Q13585 617 aa17.34■□□□□ 0.37
SEC13-207ENST00000397105 DGUOKQ16854 277 aa17.34■□□□□ 0.37
SEC13-207ENST00000397105 ASPHD2Q6ICH7 369 aa17.34■□□□□ 0.37
SEC13-207ENST00000397105 C1orf229Q6ZS94 237 aaPredicted RBP17.34■□□□□ 0.37
SEC13-207ENST00000397105 SATL1Q86VE3 508 aa17.34■□□□□ 0.37
SEC13-207ENST00000397105 CD177Q8N6Q3 437 aa17.34■□□□□ 0.37
SEC13-207ENST00000397105 PNLDC1Q8NA58 520 aaKnown RBP17.34■□□□□ 0.37
SEC13-207ENST00000397105 ZSCAN4Q8NAM6 433 aaPredicted RBP17.34■□□□□ 0.37
SEC13-207ENST00000397105 NANPQ8TBE9 248 aa17.34■□□□□ 0.37
SEC13-207ENST00000397105 THRSPQ92748 146 aa17.34■□□□□ 0.37
SEC13-207ENST00000397105 OR14A2Q96R54 314 aa17.34■□□□□ 0.37
SEC13-207ENST00000397105 TMEM138Q9NPI0 162 aa17.34■□□□□ 0.37
SEC13-207ENST00000397105 SLC25A10Q9UBX3 287 aaPredicted RBP17.34■□□□□ 0.37
SEC13-207ENST00000397105 TMEM225BP0DP42 221 aa17.33■□□□□ 0.36
SEC13-207ENST00000397105 BCL3P20749 454 aa17.33■□□□□ 0.36
SEC13-207ENST00000397105 GABARAPL2P60520 117 aa17.33■□□□□ 0.36
SEC13-207ENST00000397105 SCGB2A2Q13296 93 aa17.33■□□□□ 0.36
SEC13-207ENST00000397105 FIP1L1Q6UN15 594 aaKnown RBP17.33■□□□□ 0.36
SEC13-207ENST00000397105 C1QL2Q7Z5L3 287 aa17.33■□□□□ 0.36
SEC13-207ENST00000397105 SAXO1Q8IYX7 474 aa17.33■□□□□ 0.36
SEC13-207ENST00000397105 ZNF561Q8N587 486 aa17.33■□□□□ 0.36
SEC13-207ENST00000397105 ZNRF1Q8ND25 227 aa17.33■□□□□ 0.36
SEC13-207ENST00000397105 OR51A2Q8NGJ7 313 aa17.33■□□□□ 0.36
SEC13-207ENST00000397105 OR5D18Q8NGL1 313 aa17.33■□□□□ 0.36
SEC13-207ENST00000397105 UFD1Q92890 307 aa17.33■□□□□ 0.36
SEC13-207ENST00000397105 EMG1Q92979 244 aaKnown RBP17.33■□□□□ 0.36
SEC13-207ENST00000397105 YTHDF1Q9BYJ9 559 aaKnown RBP17.33■□□□□ 0.36
SEC13-207ENST00000397105 RHOFQ9HBH0 211 aa17.33■□□□□ 0.36
SEC13-207ENST00000397105 ISYNA1Q9NPH2 558 aa17.33■□□□□ 0.36
SEC13-207ENST00000397105 OR14J1Q9UGF5 321 aa17.33■□□□□ 0.36
SEC13-207ENST00000397105 MAB21L2Q9Y586 359 aa17.33■□□□□ 0.36
SEC13-207ENST00000397105 WNK2Q9Y3S1 2297 aa17.33■□□□□ 0.36
SEC13-207ENST00000397105 ARHGAP32A7KAX9 2087 aa17.32■□□□□ 0.36
SEC13-207ENST00000397105 TRBV5-7A0A0A0MS05 114 aa17.32■□□□□ 0.36
SEC13-207ENST00000397105 ANGPTL7O43827 346 aa17.32■□□□□ 0.36
SEC13-207ENST00000397105 MRPS14O60783 128 aaKnown RBP17.32■□□□□ 0.36
SEC13-207ENST00000397105 GPX5O75715 221 aa17.32■□□□□ 0.36
SEC13-207ENST00000397105 HSMCR30P0CW71 290 aa17.32■□□□□ 0.36
SEC13-207ENST00000397105 PPIAL4GP0DN37 164 aa17.32■□□□□ 0.36
SEC13-207ENST00000397105 SELLP14151 372 aa17.32■□□□□ 0.36
SEC13-207ENST00000397105 NDUFB7P17568 137 aa17.32■□□□□ 0.36
SEC13-207ENST00000397105 ADRA2CP18825 462 aa17.32■□□□□ 0.36
SEC13-207ENST00000397105 MAPK3P27361 379 aaPredicted RBP17.32■□□□□ 0.36
SEC13-207ENST00000397105 TGFBR2P37173 567 aa17.32■□□□□ 0.36
SEC13-207ENST00000397105 MAP2K4P45985 399 aa17.32■□□□□ 0.36
SEC13-207ENST00000397105 NPBWR2P48146 333 aa17.32■□□□□ 0.36
SEC13-207ENST00000397105 CAV3P56539 151 aa17.32■□□□□ 0.36
SEC13-207ENST00000397105 RNF144BQ7Z419 303 aa17.32■□□□□ 0.36
SEC13-207ENST00000397105 FAM58AQ8N1B3 248 aa17.32■□□□□ 0.36
SEC13-207ENST00000397105 FGFRL1Q8N441 504 aa17.32■□□□□ 0.36
SEC13-207ENST00000397105 OR52N4Q8NGI2 321 aa17.32■□□□□ 0.36
SEC13-207ENST00000397105 GPER1Q99527 375 aa17.32■□□□□ 0.36
SEC13-207ENST00000397105 RBFOX1Q9NWB1 397 aaKnown RBP17.32■□□□□ 0.36
SEC13-207ENST00000397105 METRNQ9UJH8 293 aa17.32■□□□□ 0.36
SEC13-207ENST00000397105 RPUSD1Q9UJJ7 312 aaKnown RBP17.32■□□□□ 0.36
SEC13-207ENST00000397105 A0A1W2PPK0 400 aa17.31■□□□□ 0.36
SEC13-207ENST00000397105 KDM4BO94953 1096 aa17.31■□□□□ 0.36
SEC13-207ENST00000397105 IGFBP3P17936 291 aaPredicted RBP17.31■□□□□ 0.36
SEC13-207ENST00000397105 BDKRB2P30411 391 aa17.31■□□□□ 0.36
SEC13-207ENST00000397105 CAPZA1P52907 286 aa17.31■□□□□ 0.36
SEC13-207ENST00000397105 TPBGQ13641 420 aa17.31■□□□□ 0.36
SEC13-207ENST00000397105 LIPKQ5VXJ0 399 aa17.31■□□□□ 0.36
SEC13-207ENST00000397105 CRIP3Q6Q6R5 217 aa17.31■□□□□ 0.36
SEC13-207ENST00000397105 TMEM185AQ8NFB2 350 aa17.31■□□□□ 0.36
SEC13-207ENST00000397105 ORAI1Q96D31 301 aa17.31■□□□□ 0.36
SEC13-207ENST00000397105 DMRTB1Q96MA1 342 aa17.31■□□□□ 0.36
SEC13-207ENST00000397105 DERL3Q96Q80 235 aa17.31■□□□□ 0.36
SEC13-207ENST00000397105 TMED9Q9BVK6 235 aa17.31■□□□□ 0.36
SEC13-207ENST00000397105 CNTD2Q9H8S5 307 aa17.31■□□□□ 0.36
SEC13-207ENST00000397105 GLS2Q9UI32 602 aa17.31■□□□□ 0.36
SEC13-207ENST00000397105 IGKV1-12A0A0C4DH73 117 aa17.3■□□□□ 0.36
SEC13-207ENST00000397105 IGKV1D-12P01611 117 aa17.3■□□□□ 0.36
SEC13-207ENST00000397105 CHRM2P08172 466 aa17.3■□□□□ 0.36
SEC13-207ENST00000397105 FSTP19883 344 aa17.3■□□□□ 0.36
SEC13-207ENST00000397105 ZNF93P35789 620 aaPredicted RBP17.3■□□□□ 0.36
SEC13-207ENST00000397105 CEBPDP49716 269 aaPredicted RBP17.3■□□□□ 0.36
SEC13-207ENST00000397105 ZP1P60852 638 aa17.3■□□□□ 0.36
SEC13-207ENST00000397105 MLLT11Q13015 90 aaPredicted RBP17.3■□□□□ 0.36
SEC13-207ENST00000397105 TBCEQ15813 527 aaPredicted RBP17.3■□□□□ 0.36
SEC13-207ENST00000397105 ACSM3Q53FZ2 586 aa17.3■□□□□ 0.36
SEC13-207ENST00000397105 DDI2Q5TDH0 399 aa17.3■□□□□ 0.36
SEC13-207ENST00000397105 PRIMA1Q86XR5 153 aa17.3■□□□□ 0.36
SEC13-207ENST00000397105 LY6G5BQ8NDX9 201 aa17.3■□□□□ 0.36
SEC13-207ENST00000397105 H1FXQ92522 213 aaKnown RBP17.3■□□□□ 0.36
SEC13-207ENST00000397105 DCTN5Q9BTE1 182 aa17.3■□□□□ 0.36
SEC13-207ENST00000397105 SEBOXQ9HB31 216 aaPredicted RBP17.3■□□□□ 0.36
SEC13-207ENST00000397105 HMG20AQ9NP66 347 aa17.3■□□□□ 0.36
SEC13-207ENST00000397105 FOXJ3Q9UPW0 622 aa17.3■□□□□ 0.36
SEC13-207ENST00000397105 GABRPO00591 440 aa17.29■□□□□ 0.36
SEC13-207ENST00000397105 PRKACAP17612 351 aa17.29■□□□□ 0.36
SEC13-207ENST00000397105 FGF12P61328 243 aa17.29■□□□□ 0.36
SEC13-207ENST00000397105 ARMCX4Q5H9R4 360 aa17.29■□□□□ 0.36
SEC13-207ENST00000397105 SPIN3Q5JUX0 258 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms