RNA–Protein interactions for RNA: ENST00000397081.7

RAPGEF4-201, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAPGEF4, Length 4,299 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-201ENST00000397081 MYOZ1Q9NP98 299 aaPredicted RBP12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 DNAJB11Q9UBS4 358 aa12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 MRPS17Q9Y2R5 130 aaKnown RBP12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 MELTFP08582 738 aa12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 MALLQ13021 153 aa12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 C5orf46Q6UWT4 87 aa12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 LGI3Q8N145 548 aa12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 PLPP5Q8NEB5 264 aa12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 MR1Q95460 341 aa12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 RHOVQ96L33 236 aa12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 ZNF385AQ96PM9 386 aaKnown RBP12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 ZNF286AQ9HBT8 521 aa12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 ZNF107Q9UII5 783 aaPredicted RBP12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 ANXA10Q9UJ72 324 aa12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 IGKV1-9A0A0C4DH69 117 aa12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 F8VVB4 439 aa12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 F8VWA3 439 aa12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 EIF2S3P41091 472 aaKnown RBP12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 RAB5CP51148 216 aa12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 VAX1Q5SQQ9 334 aa12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 AADACL3Q5VUY0 350 aa12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 SLC39A7Q92504 469 aa12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 CPNE4Q96A23 557 aaPredicted RBP12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 SLC35B3Q9H1N7 401 aa12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 P4HTMQ9NXG6 502 aa12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 R4GN57 208 aa12.9□□□□□ -0.34
RAPGEF4-201ENST00000397081 PNLIPRP3Q17RR3 467 aa12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 OR14L1PQ8NHC6 308 aa12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 ICE1Q9Y2F5 2266 aa12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 H0YL77 283 aa12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 RPS16P62249 146 aaKnown RBP12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 SMAD4Q13485 552 aaKnown RBP12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 HIST2H3PS2Q5TEC6 136 aa12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 YRDCQ86U90 279 aaKnown RBP12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 SUCNR1Q9BXA5 334 aa12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 RARRES3Q9UL19 164 aa12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 KCNS2Q9ULS6 477 aa12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 EML5Q05BV3 1969 aa12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 IGHV1OR21-1A0A087WYE8 117 aa12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 SERPINE3A8MV23 424 aa12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 AP4M1O00189 453 aa12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 ALDH3B1P43353 468 aa12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 FASLGP48023 281 aa12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 EFNA3P52797 238 aa12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 GRB2P62993 217 aaKnown RBP12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 ZNF845Q96IR2 970 aaPredicted RBP12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 NIPSNAP3BQ9BS92 247 aa12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 KIAA2026Q5HYC2 2103 aa12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 REV3LO60673 3130 aa12.89□□□□□ -0.35
RAPGEF4-201ENST00000397081 FTCDNL1E5RQL4 147 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 CELA2AP08217 269 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 EDN3P14138 238 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 ACKR3P25106 362 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 ZNF774Q6NX45 483 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 OR5C1Q8NGR4 320 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 PLEKHA2Q9HB19 425 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 PARP11Q9NR21 331 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 CACFD1Q9UGQ2 172 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 PRRC2CQ9Y520 2896 aaKnown RBP12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 NPIPB7O75200 414 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 FABP4P15090 132 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 RNF212Q495C1 297 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 BEND4Q6ZU67 534 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 SLC25A26Q70HW3 274 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 SLC2A9Q9NRM0 540 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 TP53I11O14683 189 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 PPP1R2P9O14990 202 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 CLN5O75503 358 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 CCL2P13500 99 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 ELLP55199 621 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 TESK1Q15569 626 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 HMGN3Q15651 99 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 FSCN3Q9NQT6 498 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 A0A1W2PQD3 144 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 NDUFS6O75380 124 aaKnown RBP12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 DEDDO75618 318 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 SCAF4O95104 1147 aaKnown RBP12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 SMIM6P0DI80 62 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 FGF8P55075 233 aaPredicted RBP12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 ZNF239Q16600 458 aaKnown RBP12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 THNSL2Q86YJ6 484 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 CMTM1Q8IZ96 169 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 MOB1AQ9H8S9 216 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 PCDH15Q96QU1 1955 aa12.88□□□□□ -0.35
RAPGEF4-201ENST00000397081 MSTNO14793 375 aa12.87□□□□□ -0.35
RAPGEF4-201ENST00000397081 DHRS3O75911 302 aa12.87□□□□□ -0.35
RAPGEF4-201ENST00000397081 RBP2P50120 134 aa12.87□□□□□ -0.35
RAPGEF4-201ENST00000397081 ARL6IP1Q15041 203 aa12.87□□□□□ -0.35
RAPGEF4-201ENST00000397081 CCDC71LQ8N9Z2 235 aa12.87□□□□□ -0.35
RAPGEF4-201ENST00000397081 SCGB1C1Q8TD33 95 aa12.87□□□□□ -0.35
RAPGEF4-201ENST00000397081 SMIM8Q96KF7 97 aa12.87□□□□□ -0.35
RAPGEF4-201ENST00000397081 OXGR1Q96P68 337 aa12.87□□□□□ -0.35
RAPGEF4-201ENST00000397081 E9PLN8 166 aa12.87□□□□□ -0.35
RAPGEF4-201ENST00000397081 TNFSF11O14788 317 aa12.87□□□□□ -0.35
RAPGEF4-201ENST00000397081 HLA-GP17693 338 aa12.87□□□□□ -0.35
RAPGEF4-201ENST00000397081 IZUMO4Q1ZYL8 232 aa12.87□□□□□ -0.35
RAPGEF4-201ENST00000397081 NAA60Q9H7X0 242 aa12.87□□□□□ -0.35
RAPGEF4-201ENST00000397081 CRLF2Q9HC73 371 aa12.87□□□□□ -0.35
RAPGEF4-201ENST00000397081 PQLC2LA1A4F0 135 aa12.87□□□□□ -0.35
RAPGEF4-201ENST00000397081 NKX2-6A6NCS4 301 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms