RNA–Protein interactions for RNA: ENST00000396386.6

CBX3-202, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-202ENST00000396386 FAM90A7PA6NKC0 464 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 FAM90A22PA8MWA6 464 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 FAM90A12PA8MX19 464 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 FAM90A5PA8MXJ8 464 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 FAM90A23PA8MXZ1 464 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 SFT2D2O95562 160 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 FAM90A15PP0C7V4 464 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 FAM90A13PP0C7W8 464 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 FAM90A14PP0C7W9 464 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 FAM90A24PP0C7X0 464 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 RPA2P15927 270 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 IGHV1-2P23083 117 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 S100A11P31949 105 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 HAAOP46952 286 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 BAMBIQ13145 260 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 TMUB2Q71RG4 321 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 KCTD9Q7L273 389 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 CCDC36Q8IYA8 594 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 ZADH2Q8N4Q0 377 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 Q8NFD4 153 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 SLAMF9Q96A28 289 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 HIST1H2AAQ96QV6 131 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 C14orf166Q9Y224 244 aaKnown RBP12.86□□□□□ -0.35
CBX3-202ENST00000396386 MAB21L2Q9Y586 359 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 MPC1Q9Y5U8 109 aa12.86□□□□□ -0.35
CBX3-202ENST00000396386 A0A0B4J2A0 478 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 OR5H14A6NHG9 310 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 DBX1A6NMT0 343 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 ZNF732B4DXR9 585 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 RP2O75695 350 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 PGAM2P15259 253 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 ZNF14P17017 642 aaPredicted RBP12.85□□□□□ -0.35
CBX3-202ENST00000396386 BCL3P20749 454 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 PMELP40967 661 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 NPBWR2P48146 333 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 IKZF1Q13422 519 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 ZNF169Q14929 603 aaPredicted RBP12.85□□□□□ -0.35
CBX3-202ENST00000396386 ELP2Q6IA86 826 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 TMEM200AQ86VY9 491 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 OR8H3Q8N146 312 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 BHLHE23Q8NDY6 225 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 OR5A2Q8NGI9 324 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 OR5M9Q8NGP3 310 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 DYRK2Q92630 601 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 RTBDNQ9BSG5 229 aaPredicted RBP12.85□□□□□ -0.35
CBX3-202ENST00000396386 OR51B6Q9H340 312 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 C12orf4Q9NQ89 552 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 PLSCR2Q9NRY7 297 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 NECAP2Q9NVZ3 263 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 SHPKQ9UHJ6 478 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 ANKRD34BA5PLL1 514 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 OR5B21A6NL26 309 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 FAM25EA8MYX2 175 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 CNOT4O95628 575 aaKnown RBP12.85□□□□□ -0.35
CBX3-202ENST00000396386 PI3P19957 117 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 FUT3P21217 361 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 FGF12P61328 243 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 MRPL49Q13405 166 aaKnown RBP12.85□□□□□ -0.35
CBX3-202ENST00000396386 C6orf183Q5T699 404 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 Q6ZT83 130 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 MKXQ8IYA7 352 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 CNEP1R1Q8N9A8 125 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 COQ8AQ8NI60 647 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 WNT2BQ93097 391 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 ZNF2Q9BSG1 426 aaPredicted RBP12.85□□□□□ -0.35
CBX3-202ENST00000396386 ARL6Q9H0F7 186 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 CDH20Q9HBT6 801 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 ZNF286AQ9HBT8 521 aa12.85□□□□□ -0.35
CBX3-202ENST00000396386 LYZL6O75951 148 aa12.84□□□□□ -0.35
CBX3-202ENST00000396386 OR7C1O76099 320 aaPredicted RBP12.84□□□□□ -0.35
CBX3-202ENST00000396386 OPRM1P35372 400 aa12.84□□□□□ -0.35
CBX3-202ENST00000396386 SLC9A3R2Q15599 337 aa12.84□□□□□ -0.35
CBX3-202ENST00000396386 ACSF3Q4G176 576 aaPredicted RBP12.84□□□□□ -0.35
CBX3-202ENST00000396386 NHLRC3Q5JS37 347 aa12.84□□□□□ -0.35
CBX3-202ENST00000396386 OR2A2Q6IF42 318 aa12.84□□□□□ -0.35
CBX3-202ENST00000396386 CLEC18BQ6UXF7 455 aa12.84□□□□□ -0.35
CBX3-202ENST00000396386 GSG1LQ6UXU4 331 aa12.84□□□□□ -0.35
CBX3-202ENST00000396386 C3P1Q6ZMU1 363 aa12.84□□□□□ -0.35
CBX3-202ENST00000396386 BATF2Q8N1L9 274 aa12.84□□□□□ -0.35
CBX3-202ENST00000396386 C9orf106Q8NAJ2 232 aa12.84□□□□□ -0.35
CBX3-202ENST00000396386 OR6K3Q8NGY3 331 aa12.84□□□□□ -0.35
CBX3-202ENST00000396386 OR5P3Q8WZ94 311 aa12.84□□□□□ -0.35
CBX3-202ENST00000396386 MFFQ9GZY8 342 aa12.84□□□□□ -0.35
CBX3-202ENST00000396386 ZNF442Q9H7R0 627 aa12.84□□□□□ -0.35
CBX3-202ENST00000396386 ZNF629Q9UEG4 869 aaPredicted RBP12.84□□□□□ -0.35
CBX3-202ENST00000396386 PRSS44E7EML9 344 aa12.83□□□□□ -0.36
CBX3-202ENST00000396386 TRAPPC2LH3BP13 241 aa12.83□□□□□ -0.36
CBX3-202ENST00000396386 CFDP00746 253 aaPredicted RBP12.83□□□□□ -0.36
CBX3-202ENST00000396386 OR5H8P0DN80 308 aa12.83□□□□□ -0.36
CBX3-202ENST00000396386 SLC25A4P12235 298 aa12.83□□□□□ -0.36
CBX3-202ENST00000396386 SUPT4H1P63272 117 aaKnown RBP12.83□□□□□ -0.36
CBX3-202ENST00000396386 GABRA6Q16445 453 aa12.83□□□□□ -0.36
CBX3-202ENST00000396386 TMEM65Q6PI78 240 aa12.83□□□□□ -0.36
CBX3-202ENST00000396386 SLC22A25Q6T423 547 aa12.83□□□□□ -0.36
CBX3-202ENST00000396386 SEC22AQ96IW7 307 aa12.83□□□□□ -0.36
CBX3-202ENST00000396386 NCOR2Q9Y618 2525 aa12.83□□□□□ -0.36
CBX3-202ENST00000396386 DOCK7Q96N67 2140 aa12.83□□□□□ -0.36
CBX3-202ENST00000396386 C5orf51A6NDU8 294 aa12.82□□□□□ -0.36
CBX3-202ENST00000396386 TPD52L2O43399 206 aaKnown RBP12.82□□□□□ -0.36
CBX3-202ENST00000396386 SMPD2O60906 423 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms