RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 OR52I2Q8NH67 350 aa17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 YIPF5Q969M3 257 aa17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 ARHGAP5-AS1Q96IT6 56 aa17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 DYNLRB1Q9NP97 96 aa17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 C1orf123Q9NWV4 160 aa17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 ZNF462Q96JM2 2506 aa17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 ISPDA4D126 451 aa17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 FOXI3A8MTJ6 420 aaPredicted RBP17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 ACAA1P09110 424 aaPredicted RBP17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 HIST1H1DP16402 221 aaKnown RBP17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 SPRNQ5BIV9 151 aa17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 NHLRC3Q5JS37 347 aa17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 POC1AQ8NBT0 407 aa17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 TRIM63Q969Q1 353 aa17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 POM121Q96HA1 1249 aa17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 KLF2Q9Y5W3 355 aaPredicted RBP17.28■□□□□ 0.36
VCPKMT-202ENST00000395860 LANCL1O43813 399 aa17.27■□□□□ 0.35
VCPKMT-202ENST00000395860 NXPH2O95156 264 aa17.27■□□□□ 0.35
VCPKMT-202ENST00000395860 ADH4P08319 380 aa17.27■□□□□ 0.35
VCPKMT-202ENST00000395860 GSTP1P09211 210 aaKnown RBP17.27■□□□□ 0.35
VCPKMT-202ENST00000395860 GMFBP60983 142 aa17.27■□□□□ 0.35
VCPKMT-202ENST00000395860 ERVK11-1P61568 191 aa17.27■□□□□ 0.35
VCPKMT-202ENST00000395860 GUCA2AQ02747 115 aa17.27■□□□□ 0.35
VCPKMT-202ENST00000395860 DAZAP2Q15038 168 aaPredicted RBP17.27■□□□□ 0.35
VCPKMT-202ENST00000395860 MST1LQ2TV78 715 aa17.27■□□□□ 0.35
VCPKMT-202ENST00000395860 NKAPLQ5M9Q1 402 aa17.27■□□□□ 0.35
VCPKMT-202ENST00000395860 ZNF57Q68EA5 555 aaPredicted RBP17.27■□□□□ 0.35
VCPKMT-202ENST00000395860 RTN4RL2Q86UN3 420 aa17.27■□□□□ 0.35
VCPKMT-202ENST00000395860 FBXW5Q969U6 566 aa17.27■□□□□ 0.35
VCPKMT-202ENST00000395860 NRIP2Q9BQI9 281 aa17.27■□□□□ 0.35
VCPKMT-202ENST00000395860 PECRQ9BY49 303 aa17.27■□□□□ 0.35
VCPKMT-202ENST00000395860 MS4A5Q9H3V2 200 aa17.27■□□□□ 0.35
VCPKMT-202ENST00000395860 FN3KRPQ9HA64 309 aa17.27■□□□□ 0.35
VCPKMT-202ENST00000395860 IL36RNQ9UBH0 155 aa17.27■□□□□ 0.35
VCPKMT-202ENST00000395860 ELF5Q9UKW6 265 aaPredicted RBP17.27■□□□□ 0.35
VCPKMT-202ENST00000395860 LINC00854A0A1B0GVQ3 168 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 FAM90A10PA6NDY2 464 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 FAM90A18PA6NE21 464 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 FAM90A16PA6NEW6 464 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 FAM90A20PA6NIJ5 464 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 FAM90A8PA6NJQ4 464 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 FAM90A7PA6NKC0 464 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 FAM90A22PA8MWA6 464 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 FAM90A12PA8MX19 464 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 FAM90A5PA8MXJ8 464 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 FAM90A23PA8MXZ1 464 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 PRSS44E7EML9 344 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 TPD52L2O43399 206 aaKnown RBP17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 NOS1APO75052 506 aaPredicted RBP17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 FAM90A15PP0C7V4 464 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 FAM90A13PP0C7W8 464 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 FAM90A14PP0C7W9 464 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 FAM90A24PP0C7X0 464 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 GATA4P43694 442 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 DEFA1P59665 94 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 DEFA3P59666 94 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 SRSF1Q07955 248 aaKnown RBP eCLIP17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 ARL6IP1Q15041 203 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 SIGIRRQ6IA17 410 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 MOGAT3Q86VF5 341 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 NEDD4LQ96PU5 975 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 PLEKHJ1Q9NW61 149 aa17.26■□□□□ 0.35
VCPKMT-202ENST00000395860 C3orf80F5H4A9 247 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 SULT1C2O00338 296 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 MFNGO00587 321 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 OR7C1O76099 320 aaPredicted RBP17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 CD55P08174 381 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 MELTFP08582 738 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 SNRPD2P62316 118 aaKnown RBP17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 PDCD1Q15116 288 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 HACD4Q5VWC8 232 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 ZCCHC24Q8N2G6 241 aaKnown RBP17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 LRRC29Q8WV35 223 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 SCPEP1Q9HB40 452 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 KLK11Q9UBX7 282 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 KCNK7Q9Y2U2 307 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 VGLL3A8MV65 326 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 ORC5O43913 435 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 RBBP9O75884 186 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 TNFRSF1AP19438 455 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 GLRA1P23415 457 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 GDNFP39905 211 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 CCL8P80075 99 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 SWI5Q1ZZU3 235 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 RGS21Q2M5E4 152 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 MPV17LQ2QL34 196 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 FAM209AQ5JX71 171 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 OLFML2AQ68BL7 652 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 FIP1L1Q6UN15 594 aaKnown RBP17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 DNM1P46Q6ZS02 220 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 C6orf201Q7Z4U5 140 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 LINC00596Q86U02 117 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 POC5Q8NA72 575 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 OR10Z1Q8NGY1 313 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 GPX8Q8TED1 209 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 SEH1LQ96EE3 360 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 DECR2Q9NUI1 292 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 ZNF581Q9P0T4 197 aa17.25■□□□□ 0.35
VCPKMT-202ENST00000395860 MEIS3P1A6NDR6 274 aa17.24■□□□□ 0.35
VCPKMT-202ENST00000395860 A6NNC1 897 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms