RNA–Protein interactions for RNA: ENST00000395859.2

VCPKMT-201, Transcript of valosin containing protein lysine methyltransferase, humanhuman

TSL 1 (best) BASIC

Gene VCPKMT, Length 795 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-201ENST00000395859 MICU1Q9BPX6 476 aa10.72□□□□□ -0.69
VCPKMT-201ENST00000395859 ZNF556Q9HAH1 456 aa10.72□□□□□ -0.69
VCPKMT-201ENST00000395859 SRA1Q9HD15 236 aaKnown RBP10.72□□□□□ -0.69
VCPKMT-201ENST00000395859 KCNG2Q9UJ96 466 aa10.72□□□□□ -0.69
VCPKMT-201ENST00000395859 HERC1Q15751 4861 aa10.72□□□□□ -0.69
VCPKMT-201ENST00000395859 H3BUI4 141 aa10.71□□□□□ -0.69
VCPKMT-201ENST00000395859 LDLRAD4O15165 306 aa10.71□□□□□ -0.69
VCPKMT-201ENST00000395859 GADD45GO95257 159 aa10.71□□□□□ -0.69
VCPKMT-201ENST00000395859 GNALP38405 381 aa10.71□□□□□ -0.69
VCPKMT-201ENST00000395859 RPS27P42677 84 aaKnown RBP10.71□□□□□ -0.69
VCPKMT-201ENST00000395859 INSL3P51460 131 aa10.71□□□□□ -0.69
VCPKMT-201ENST00000395859 MICAQ29983 383 aa10.71□□□□□ -0.69
VCPKMT-201ENST00000395859 ZNF260Q3ZCT1 412 aa10.71□□□□□ -0.69
VCPKMT-201ENST00000395859 DPY19L2P2Q6ZN68 376 aa10.71□□□□□ -0.69
VCPKMT-201ENST00000395859 TCF23Q7RTU1 214 aa10.71□□□□□ -0.69
VCPKMT-201ENST00000395859 COMMD1Q8N668 190 aa10.71□□□□□ -0.69
VCPKMT-201ENST00000395859 OR4P4Q8NGL7 312 aa10.71□□□□□ -0.69
VCPKMT-201ENST00000395859 OR4Q3Q8NH05 313 aa10.71□□□□□ -0.69
VCPKMT-201ENST00000395859 OR8U1Q8NH10 309 aa10.71□□□□□ -0.69
VCPKMT-201ENST00000395859 CHPT1Q8WUD6 406 aa10.71□□□□□ -0.69
VCPKMT-201ENST00000395859 GATAD1Q8WUU5 269 aa10.71□□□□□ -0.69
VCPKMT-201ENST00000395859 KCNJ15Q99712 375 aa10.71□□□□□ -0.69
VCPKMT-201ENST00000395859 RTL8AQ9BWD3 113 aa10.71□□□□□ -0.69
VCPKMT-201ENST00000395859 MPC1Q9Y5U8 109 aa10.71□□□□□ -0.69
VCPKMT-201ENST00000395859 TRIM64CA6NLI5 447 aa10.7□□□□□ -0.7
VCPKMT-201ENST00000395859 PRR23D1E9PI22 279 aaPredicted RBP10.7□□□□□ -0.7
VCPKMT-201ENST00000395859 M0QZK8 103 aa10.7□□□□□ -0.7
VCPKMT-201ENST00000395859 DLGAP1O14490 977 aa10.7□□□□□ -0.7
VCPKMT-201ENST00000395859 ZNF728P0DKX0 622 aa10.7□□□□□ -0.7
VCPKMT-201ENST00000395859 PRR23D2P0DMB1 279 aaPredicted RBP10.7□□□□□ -0.7
VCPKMT-201ENST00000395859 GSK3AP49840 483 aa10.7□□□□□ -0.7
VCPKMT-201ENST00000395859 PRKXP51817 358 aa10.7□□□□□ -0.7
VCPKMT-201ENST00000395859 CAPZA1P52907 286 aa10.7□□□□□ -0.7
VCPKMT-201ENST00000395859 ESRRGP62508 458 aa10.7□□□□□ -0.7
VCPKMT-201ENST00000395859 KCTD21Q4G0X4 260 aa10.7□□□□□ -0.7
VCPKMT-201ENST00000395859 CD300LDQ6UXZ3 194 aa10.7□□□□□ -0.7
VCPKMT-201ENST00000395859 KRT74Q7RTS7 529 aa10.7□□□□□ -0.7
VCPKMT-201ENST00000395859 ZNF561Q8N587 486 aa10.7□□□□□ -0.7
VCPKMT-201ENST00000395859 OR4C15Q8NGM1 316 aa10.7□□□□□ -0.7
VCPKMT-201ENST00000395859 REEP6Q96HR9 211 aa10.7□□□□□ -0.7
VCPKMT-201ENST00000395859 NMNAT3Q96T66 252 aa10.7□□□□□ -0.7
VCPKMT-201ENST00000395859 APOL4Q9BPW4 351 aa10.7□□□□□ -0.7
VCPKMT-201ENST00000395859 PAPOLGQ9BWT3 736 aaKnown RBP10.7□□□□□ -0.7
VCPKMT-201ENST00000395859 GABARAPL3Q9BY60 117 aa10.7□□□□□ -0.7
VCPKMT-201ENST00000395859 ZNF319Q9P2F9 582 aa10.7□□□□□ -0.7
VCPKMT-201ENST00000395859 BLOC1S6Q9UL45 172 aa10.7□□□□□ -0.7
VCPKMT-201ENST00000395859 IGHV2-26A0A0B4J1V2 119 aa10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 RFPL4AA6NLU0 287 aa10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 RFPL4AL1F8VTS6 287 aa10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 MPZL2O60487 215 aa10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 MRPS14O60783 128 aaKnown RBP10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 CCNB2O95067 398 aa10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 LY86O95711 162 aa10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 LYNP07948 512 aa10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 ACKR3P25106 362 aa10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 CXCR4P61073 352 aa10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 DYNC1I2Q13409 638 aaKnown RBP10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 FGD3Q5JSP0 725 aa10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 ACP7Q6ZNF0 438 aa10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 FAM71E2Q8N5Q1 922 aa10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 RNF152Q8N8N0 203 aa10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 CSNK2A3Q8NEV1 391 aa10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 FAM46AQ96IP4 442 aaKnown RBP10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 OR8B4Q96RC9 309 aa10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 DGCR6LQ9BY27 220 aa10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 OR51I2Q9H344 312 aa10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 KRT84Q9NSB2 600 aa10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 C19orf73Q9NVV2 129 aa10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 FAM118AQ9NWS6 357 aa10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 NDUFA13Q9P0J0 144 aa10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 MYRFQ9Y2G1 1151 aa10.69□□□□□ -0.7
VCPKMT-201ENST00000395859 OR6C68A6NDL8 312 aa10.68□□□□□ -0.7
VCPKMT-201ENST00000395859 ANXA2P2A6NMY6 339 aa10.68□□□□□ -0.7
VCPKMT-201ENST00000395859 A8MZ25 164 aa10.68□□□□□ -0.7
VCPKMT-201ENST00000395859 CCRL2O00421 344 aa10.68□□□□□ -0.7
VCPKMT-201ENST00000395859 CST4P01036 141 aa10.68□□□□□ -0.7
VCPKMT-201ENST00000395859 RPSAP08865 295 aaKnown RBP10.68□□□□□ -0.7
VCPKMT-201ENST00000395859 OMPP47874 163 aa10.68□□□□□ -0.7
VCPKMT-201ENST00000395859 CDX1P47902 265 aaPredicted RBP10.68□□□□□ -0.7
VCPKMT-201ENST00000395859 ACTA2P62736 377 aa10.68□□□□□ -0.7
VCPKMT-201ENST00000395859 ACTG2P63267 376 aa10.68□□□□□ -0.7
VCPKMT-201ENST00000395859 ACTC1P68032 377 aa10.68□□□□□ -0.7
VCPKMT-201ENST00000395859 ACTA1P68133 377 aa10.68□□□□□ -0.7
VCPKMT-201ENST00000395859 PRDX4Q13162 271 aa10.68□□□□□ -0.7
VCPKMT-201ENST00000395859 C9orf152Q5JTZ5 239 aa10.68□□□□□ -0.7
VCPKMT-201ENST00000395859 LCNL1Q6ZST4 164 aa10.68□□□□□ -0.7
VCPKMT-201ENST00000395859 C8orf59Q8N0T1 100 aaPredicted RBP10.68□□□□□ -0.7
VCPKMT-201ENST00000395859 OR10G2Q8NGC3 310 aa10.68□□□□□ -0.7
VCPKMT-201ENST00000395859 RPRD1BQ9NQG5 326 aaKnown RBP10.68□□□□□ -0.7
VCPKMT-201ENST00000395859 PAPOLBQ9NRJ5 636 aaKnown RBP10.68□□□□□ -0.7
VCPKMT-201ENST00000395859 LOC100130705A0A1B0GUX0 176 aa10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 UNC119BA6NIH7 251 aa10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 ZNF850A8MQ14 1090 aa10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 ARPC3O15145 178 aa10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 TK1P04183 234 aa10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 RPLP1P05386 114 aaKnown RBP10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 PIPP12273 146 aaPredicted RBP10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 HIST1H1CP16403 213 aaKnown RBP10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 PRDX2P32119 198 aa10.67□□□□□ -0.7
VCPKMT-201ENST00000395859 BRS3P32247 399 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms