RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 IGHV3-66A0A0C4DH42 116 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 ANKRD20A5PA0PJZ0 165 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 PINLYPA6NC86 204 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 MIF4GDA9UHW6 222 aaKnown RBP3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 INS-IGF2F8WCM5 200 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 M0QZK8 103 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 CDC40O60508 579 aaKnown RBP eCLIP3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 GATBO75879 557 aaKnown RBP3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 GABARAPO95166 117 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 IFNA21P01568 189 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 RLN2P04090 185 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 CD37P11049 281 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 ZNF35P13682 527 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 F8A1P23610 371 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 PFN2P35080 140 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 SSTR5P35346 364 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 UBE2AP49459 152 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 TNFRSF9Q07011 255 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 MAD2L1BPQ15013 274 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 MAPK14Q16539 360 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 C2orf83Q53S99 150 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 ACTL10Q5JWF8 245 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 FAM92BQ6ZTR7 304 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 TMEM25Q86YD3 366 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 PHF13Q86YI8 300 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 ARIH2OSQ8N7S6 290 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 Q8N976 141 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 OR4K2Q8NGD2 314 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 OR52N1Q8NH53 320 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 KCTD4Q8WVF5 259 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 MAFIPQ8WZ33 124 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 SCGB3A2Q96PL1 93 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 PHB2Q99623 299 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 APOL4Q9BPW4 351 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 ZNF2Q9BSG1 426 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 BCL2L14Q9BZR8 327 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 ARL6Q9H0F7 186 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 NOX3Q9HBY0 568 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 MYOZ1Q9NP98 299 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 ZDHHC4Q9NPG8 344 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 NLE1Q9NVX2 485 aaPredicted RBP3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 ANAPC11Q9NYG5 84 aa3.27□□□□□ -1.89
HMGB1P10-201ENST00000395823 TRAV8-7A0A075B6U6 113 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 IGKV1-8A0A0C4DH67 115 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 A0A1B0GVX0 72 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 TVP23AA6NH52 213 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 A8MU10 97 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 EFCAB9A8MZ26 197 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 HACD1B0YJ81 288 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 TRIM49D1C9J1S8 452 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 PSMD12O00232 456 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 CCRL2O00421 344 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 NDUFA2O43678 99 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 SLC16A7O60669 478 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 CTNSO60931 367 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 OR2B3O76000 313 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 ATP6V1G2O95670 118 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 SLC25A27O95847 323 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 BCHEP06276 602 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 GUSBP08236 651 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 PSG2P11465 335 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 GTF2F2P13984 249 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 TCP1P17987 556 aaKnown RBP3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 RAB5AP20339 215 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 WARSP23381 471 aaKnown RBP3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 PPICP45877 212 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 GABRA4P48169 554 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 ACOT2P49753 483 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 PPOXP50336 477 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 NDUFA8P51970 172 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 RPS23P62266 143 aaKnown RBP3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 FLI1Q01543 452 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 MLLT11Q13015 90 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 GINS1Q14691 196 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 RWDD4Q6NW29 188 aaKnown RBP3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 TMEM205Q6UW68 189 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 DPPA2Q7Z7J5 298 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 CLVS1Q8IUQ0 354 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 WDFY1Q8IWB7 410 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 RIMKLAQ8IXN7 391 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 LGI3Q8N145 548 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 METTL13Q8N6R0 699 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 COX18Q8N8Q8 333 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 GPR26Q8NDV2 337 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 OR11L1Q8NGX0 322 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 COQ8AQ8NI60 647 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 SFXN5Q8TD22 340 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 RGP1Q92546 391 aaPredicted RBP3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 TESCQ96BS2 214 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 TLCD1Q96CP7 247 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 SMIM19Q96E16 107 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 KCTD7Q96MP8 289 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 HBEGFQ99075 208 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 TSC22D3Q99576 134 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 AIF1LQ9BQI0 150 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 TIPINQ9BVW5 301 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 PARP12Q9H0J9 701 aaKnown RBP3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 PCBD2Q9H0N5 130 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 RHOFQ9HBH0 211 aa3.26□□□□□ -1.89
HMGB1P10-201ENST00000395823 RDH14Q9HBH5 336 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms