RNA–Protein interactions for RNA: ENST00000395577.2

CDKN3-203, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-203ENST00000395577 IGHV3-74A0A0B4J1X5 117 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 VPS37CA5D8V6 355 aaPredicted RBP3.66□□□□□ -1.82
CDKN3-203ENST00000395577 NCBP2LA6PVI3 153 aaKnown RBP3.66□□□□□ -1.82
CDKN3-203ENST00000395577 M0QYV0 167 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 KPNA3O00505 521 aaPredicted RBP3.66□□□□□ -1.82
CDKN3-203ENST00000395577 SIVA1O15304 175 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 RAD1O60671 282 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 RDH16O75452 317 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 SOD1P00441 154 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 KRT7P08729 469 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 KRT16P08779 473 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 CSNK2A2P19784 350 aaPredicted RBP3.66□□□□□ -1.82
CDKN3-203ENST00000395577 MSR1P21757 451 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 RFC3P40938 356 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 CAPRIN1Q14444 709 aaKnown RBP3.66□□□□□ -1.82
CDKN3-203ENST00000395577 RGNQ15493 299 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 ARL9Q6T311 187 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 NPSR1Q6W5P4 371 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 DEFB106AQ8N104 65 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 INO80EQ8NBZ0 244 aaPredicted RBP3.66□□□□□ -1.82
CDKN3-203ENST00000395577 LRRC29Q8WV35 223 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 EXOSC8Q96B26 276 aaKnown RBP3.66□□□□□ -1.82
CDKN3-203ENST00000395577 SEH1LQ96EE3 360 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 CERS2Q96G23 380 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 ZNF799Q96GE5 643 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 C9orf72Q96LT7 481 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 FOXC2Q99958 501 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 RDH14Q9HBH5 336 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 ZC4H2Q9NQZ6 224 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 YARS2Q9Y2Z4 477 aaKnown RBP3.66□□□□□ -1.82
CDKN3-203ENST00000395577 PCYT1BQ9Y5K3 369 aaPredicted RBP3.66□□□□□ -1.82
CDKN3-203ENST00000395577 FN1P02751 2386 aaKnown RBP3.66□□□□□ -1.82
CDKN3-203ENST00000395577 ZANQ9Y493 2812 aa3.66□□□□□ -1.82
CDKN3-203ENST00000395577 FLNAP21333 2647 aaKnown RBP3.65□□□□□ -1.82
CDKN3-203ENST00000395577 CSPG4Q6UVK1 2322 aa3.65□□□□□ -1.82
CDKN3-203ENST00000395577 IGHV3-66A0A0C4DH42 116 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 INS-IGF2F8WCM5 200 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 SCELO95171 688 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 APOEP02649 317 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 SRMP19623 302 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 CSNK1A1P48729 337 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 KRTAP10-7P60409 375 aaPredicted RBP3.65□□□□□ -1.83
CDKN3-203ENST00000395577 GNA12Q03113 381 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 RCAN2Q14206 197 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.65□□□□□ -1.83
CDKN3-203ENST00000395577 PLET1Q6UQ28 207 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 FAM183BPQ6ZVS7 135 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 CBR4Q8N4T8 237 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 Q8N976 141 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 SNX31Q8N9S9 440 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 CHST4Q8NCG5 386 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 NOXO1Q8NFA2 376 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 PROKR2Q8NFJ6 384 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 OR52K1Q8NGK4 314 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 OR6K2Q8NGY2 324 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 OR51E1Q8TCB6 317 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 PATE1Q8WXA2 126 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 GALNT14Q96FL9 552 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 CATSPER2Q96P56 530 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 SLC25A39Q9BZJ4 359 aaPredicted RBP3.65□□□□□ -1.83
CDKN3-203ENST00000395577 TM6SF2Q9BZW4 377 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 IL22Q9GZX6 179 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 NOX3Q9HBY0 568 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 SLC40A1Q9NP59 571 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 MRPL40Q9NQ50 206 aaKnown RBP3.65□□□□□ -1.83
CDKN3-203ENST00000395577 DDIT4Q9NX09 232 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 TNRC6AQ8NDV7 1962 aaKnown RBP3.65□□□□□ -1.83
CDKN3-203ENST00000395577 ANK2Q01484 3957 aa3.65□□□□□ -1.83
CDKN3-203ENST00000395577 MN1Q10571 1320 aaPredicted RBP3.65□□□□□ -1.83
CDKN3-203ENST00000395577 FBN1P35555 2871 aaKnown RBP3.65□□□□□ -1.83
CDKN3-203ENST00000395577 VPS13CQ709C8 3753 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 AKAP6Q13023 2319 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 TLN2Q9Y4G6 2542 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 ARPC4-TTLL3A0A0A6YYG9 625 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 SERPINE3A8MV23 424 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 PLPP1O14494 284 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 CALUO43852 315 aaPredicted RBP3.64□□□□□ -1.83
CDKN3-203ENST00000395577 HLA-DPB1P04440 258 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 RHOCP08134 193 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 PRKACAP17612 351 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 TEAD1P28347 426 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 GPR1P46091 355 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 NDUFA8P51970 172 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 KRTAP10-3P60369 221 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 ERCC8Q13216 396 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 IHHQ14623 411 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 STK38Q15208 465 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 ELOCQ15369 112 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 BRMS1LQ5PSV4 323 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 LCE1EQ5T753 118 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 METTL21CQ5VZV1 264 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 FBXW12Q6X9E4 464 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 FAM122BQ7Z309 247 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 ABHD12BQ7Z5M8 362 aaPredicted RBP3.64□□□□□ -1.83
CDKN3-203ENST00000395577 VTCN1Q7Z7D3 282 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 KRTAP11-1Q8IUC1 163 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 CBLN2Q8IUK8 224 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 ZNF547Q8IVP9 402 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 PRSS58Q8IYP2 241 aa3.64□□□□□ -1.83
CDKN3-203ENST00000395577 FAM71AQ8IYT1 594 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms