RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 ZNF728P0DKX0 622 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 OR5H8P0DN80 308 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 RFC3P40938 356 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 RBM11P57052 281 aaKnown RBP6.23□□□□□ -1.41
SMAD1-202ENST00000394092 SUPT4H1P63272 117 aaKnown RBP6.23□□□□□ -1.41
SMAD1-202ENST00000394092 SMCO1Q147U7 214 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 ABCA11PQ4W5N1 156 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 PAN3Q58A45 887 aaKnown RBP6.23□□□□□ -1.41
SMAD1-202ENST00000394092 C1QTNF12Q5T7M4 302 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 SIGIRRQ6IA17 410 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 TMEM211Q6ICI0 200 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 DHRS13Q6UX07 377 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 ZDHHC23Q8IYP9 409 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 ZNF611Q8N823 705 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 CCDC71LQ8N9Z2 235 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 TMEM178AQ8NBL3 297 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 OR10AD1Q8NGE0 317 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 OR51F2Q8NH61 342 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 FNDC9Q8TBE3 224 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 MAFIPQ8WZ33 124 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 PIK3IP1Q96FE7 263 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 TMUB1Q9BVT8 246 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 PAPOLGQ9BWT3 736 aaKnown RBP6.23□□□□□ -1.41
SMAD1-202ENST00000394092 REG4Q9BYZ8 158 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 ACKR4Q9NPB9 350 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 ZFP57Q9NU63 452 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 GLS2Q9UI32 602 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 ST3GAL6Q9Y274 331 aa6.23□□□□□ -1.41
SMAD1-202ENST00000394092 FREM1Q5H8C1 2179 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 DNAJC13O75165 2243 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 KNTC1P50748 2209 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 C5orf49A4QMS7 147 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 F8VVB4 439 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 F8VWA3 439 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 J3QW42 95 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 TAAR5O14804 337 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 GEMIN2O14893 280 aaKnown RBP6.22□□□□□ -1.41
SMAD1-202ENST00000394092 CST4P01036 141 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 KNG1P01042 644 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 IGHV3-9P01782 118 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 CELA3AP09093 270 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 RPS2P15880 293 aaKnown RBP6.22□□□□□ -1.41
SMAD1-202ENST00000394092 PI3P19957 117 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 FUT3P21217 361 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 GLRA1P23415 457 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 PTGER4P35408 488 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 APLNRP35414 380 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 HERV-K104P61576 105 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 PPIAP62937 165 aaKnown RBP6.22□□□□□ -1.41
SMAD1-202ENST00000394092 SLC10A1Q14973 349 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 ANKRD55Q3KP44 614 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 PIGYQ3MUY2 71 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 EIF5AL1Q6IS14 154 aaKnown RBP6.22□□□□□ -1.41
SMAD1-202ENST00000394092 SLC22A25Q6T423 547 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 DHRS11Q6UWP2 260 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 LINC00596Q86U02 117 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 MKXQ8IYA7 352 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 SLC38A6Q8IZM9 456 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 FBXL14Q8N1E6 418 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 ZFP62Q8NB50 900 aaPredicted RBP6.22□□□□□ -1.41
SMAD1-202ENST00000394092 CPEB3Q8NE35 698 aaKnown RBP6.22□□□□□ -1.41
SMAD1-202ENST00000394092 BVESQ8NE79 360 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 Q8NFD4 153 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 OR56B2PQ8NGI1 322 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 FGFBP3Q8TAT2 258 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 WBP1Q96G27 269 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 AQP10Q96PS8 301 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 HIST1H2AAQ96QV6 131 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 SYT3Q9BQG1 590 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 SULT4A1Q9BR01 284 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 HDHD3Q9BSH5 251 aaPredicted RBP6.22□□□□□ -1.41
SMAD1-202ENST00000394092 FAAP24Q9BTP7 215 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 REPIN1Q9BWE0 567 aaKnown RBP6.22□□□□□ -1.41
SMAD1-202ENST00000394092 SUCNR1Q9BXA5 334 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 HES7Q9BYE0 225 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 SHARPINQ9H0F6 387 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 PLK3Q9H4B4 646 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 NARFLQ9H6Q4 476 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 LDAHQ9H6V9 325 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 ZNF442Q9H7R0 627 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 MED13Q9UHV7 2174 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 ZNF407Q9C0G0 2248 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 NCOR1O75376 2440 aa6.22□□□□□ -1.41
SMAD1-202ENST00000394092 IGKV1-12A0A0C4DH73 117 aa6.21□□□□□ -1.42
SMAD1-202ENST00000394092 PQLC2LA1A4F0 135 aa6.21□□□□□ -1.42
SMAD1-202ENST00000394092 ZSCAN5BA6NJL1 495 aa6.21□□□□□ -1.42
SMAD1-202ENST00000394092 NUDT19A8MXV4 375 aa6.21□□□□□ -1.42
SMAD1-202ENST00000394092 TEX46H3BTG2 121 aa6.21□□□□□ -1.42
SMAD1-202ENST00000394092 ADAP1O75689 374 aa6.21□□□□□ -1.42
SMAD1-202ENST00000394092 OR7C1O76099 320 aaPredicted RBP6.21□□□□□ -1.42
SMAD1-202ENST00000394092 IGKV1D-12P01611 117 aa6.21□□□□□ -1.42
SMAD1-202ENST00000394092 CD79AP11912 226 aa6.21□□□□□ -1.42
SMAD1-202ENST00000394092 ZNF250P15622 560 aa6.21□□□□□ -1.42
SMAD1-202ENST00000394092 CCNOP22674 350 aa6.21□□□□□ -1.42
SMAD1-202ENST00000394092 UCP3P55916 312 aa6.21□□□□□ -1.42
SMAD1-202ENST00000394092 FGF12P61328 243 aa6.21□□□□□ -1.42
SMAD1-202ENST00000394092 RAB1AP62820 205 aa6.21□□□□□ -1.42
SMAD1-202ENST00000394092 ARG2P78540 354 aa6.21□□□□□ -1.42
SMAD1-202ENST00000394092 PRDX4Q13162 271 aa6.21□□□□□ -1.42
SMAD1-202ENST00000394092 SRSF7Q16629 238 aaKnown RBP eCLIP6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms