RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 THNSL2Q86YJ6 484 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 ZNF680Q8NEM1 530 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 RPS4Y2Q8TD47 263 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 ST8SIA2Q92186 375 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 NIPSNAP3BQ9BS92 247 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 COMMD5Q9GZQ3 224 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 A0A1W2PNV4 684 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 ANKRD34BA5PLL1 514 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 ONECUT2O95948 504 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 CD1AP06126 327 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 SULT1A3P0DMM9 295 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 SULT1A4P0DMN0 295 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 SLC6A1P30531 599 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 HIST2H3PS2Q5TEC6 136 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 MDP1Q86V88 176 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 BAP18Q8IXM2 172 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 FOXJ2Q9P0K8 574 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 ONECUT1Q9UBC0 465 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 ALX3O95076 343 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 IGKV3-11P04433 115 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 SPAG17Q6Q759 2223 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 SLC36A1Q7Z2H8 476 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 KCNK17Q96T54 332 aa14.56□□□□□ -0.08
SCN3B-202ENST00000392770 IGHV3-43A0A0B4J1X8 118 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 IGHV3-43DP0DP04 118 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 TSPO2Q5TGU0 170 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 NHLRC1Q6VVB1 395 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 CCL17Q92583 94 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 NUDT19A8MXV4 375 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 EFNB2P52799 333 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 ZNF79Q15937 498 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 SPICQ8N5J4 248 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 HGDQ93099 445 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 SPSB2Q99619 263 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 NAA60Q9H7X0 242 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 MDFIC2A0A1B0GVS7 189 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 C3orf80F5H4A9 247 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 ADAM20O43506 726 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 ZNF239Q16600 458 aaKnown RBP14.55□□□□□ -0.08
SCN3B-202ENST00000392770 TRAT1Q6PIZ9 186 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 CHST5Q9GZS9 411 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 MTCH1Q9NZJ7 389 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 SCAF4O95104 1147 aaKnown RBP14.55□□□□□ -0.08
SCN3B-202ENST00000392770 TAGLN2P37802 199 aaKnown RBP14.55□□□□□ -0.08
SCN3B-202ENST00000392770 RFESDQ8TAC1 157 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 PINX1Q96BK5 328 aaKnown RBP14.55□□□□□ -0.08
SCN3B-202ENST00000392770 C20orf24Q9BUV8 137 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 RYDENQ9NUL5 291 aaKnown RBP14.55□□□□□ -0.08
SCN3B-202ENST00000392770 PSG11Q9UQ72 335 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 PCDHGA9Q9Y5G4 932 aaKnown RBP14.55□□□□□ -0.08
SCN3B-202ENST00000392770 ERHP84090 104 aaKnown RBP14.55□□□□□ -0.08
SCN3B-202ENST00000392770 ADIRFQ15847 76 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 HAGHQ16775 308 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 TEX261Q6UWH6 196 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 MRGPRDQ8TDS7 321 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 U3KQ87 197 aa14.55□□□□□ -0.08
SCN3B-202ENST00000392770 CLEC18AA5D8T8 446 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 PLA1AQ53H76 456 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 CLEC18CQ8NCF0 446 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 HES7Q9BYE0 225 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 NXF2Q9GZY0 626 aaKnown RBP14.54□□□□□ -0.08
SCN3B-202ENST00000392770 TMEM231Q9H6L2 316 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 NARFLQ9H6Q4 476 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 ZNF724A8MTY0 619 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 TGFBR3LH3BV60 316 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 PLXNA3P51805 1871 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 LCN15Q6UWW0 184 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 AMELYQ99218 206 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 OR2D2Q9H210 308 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 STARD10Q9Y365 291 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 MTCL1Q9Y4B5 1905 aaKnown RBP14.54□□□□□ -0.08
SCN3B-202ENST00000392770 C17orf51A8MQB3 221 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 VSIG8P0DPA2 414 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 HFEQ30201 348 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 GNG13Q9P2W3 67 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 IGLV1-36A0A0B4J1U3 117 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 H3BP45 60 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 TBX6O95947 436 aaPredicted RBP14.54□□□□□ -0.08
SCN3B-202ENST00000392770 KCNJ3P48549 501 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 IGFBP7Q16270 282 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 PIGYQ3MUY2 71 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 FAM27BQ5VT28 67 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 POC1BQ8TC44 478 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 RND1Q92730 232 aa14.54□□□□□ -0.08
SCN3B-202ENST00000392770 OR5AC1P0C628 307 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 ACP1P24666 158 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 KLF9Q13886 244 aaPredicted RBP14.53□□□□□ -0.08
SCN3B-202ENST00000392770 SLC25A40Q8TBP6 338 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 PIK3IP1Q96FE7 263 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 ATPIF1Q9UII2 106 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 KRASP01116 189 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 P2RX3P56373 397 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 RPUSD3Q6P087 351 aaKnown RBP14.53□□□□□ -0.08
SCN3B-202ENST00000392770 C17orf78Q8N4C9 275 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 OR5D13Q8NGL4 314 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 LNP1A1A4G5 178 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 IGF2P01344 180 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 MGST1P10620 155 aaKnown RBP14.53□□□□□ -0.08
SCN3B-202ENST00000392770 RAB13P51153 203 aa14.53□□□□□ -0.08
SCN3B-202ENST00000392770 TINAGQ9UJW2 476 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms