RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 SYT6Q5T7P8 510 aaPredicted RBP0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 LIN9Q5TKA1 542 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 DUPD1Q68J44 220 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 WDR59Q6PJI9 974 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 CLEC18BQ6UXF7 455 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 TMPPEQ6ZT21 453 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 TCF24Q7RTU0 167 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 LINC00523Q86TU6 105 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 COMTD1Q86VU5 262 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 AMN1Q8IY45 258 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 CPNE9Q8IYJ1 553 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 ARHGAP18Q8N392 663 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 C3orf22Q8N5N4 141 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 LY6G5BQ8NDX9 201 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 ZNF555Q8NEP9 628 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 OR5H2Q8NGV7 314 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 ACTL9Q8TC94 416 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 ZNF707Q96C28 371 aaPredicted RBP0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 CENPNQ96H22 339 aaPredicted RBP0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 PPP1R36Q96LQ0 422 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 OR2A7Q96R45 310 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 SRRQ9GZT4 340 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 COA1Q9GZY4 146 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 DSN1Q9H410 356 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 WDR55Q9H6Y2 383 aaPredicted RBP0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 RABL2AQ9UBK7 228 aaPredicted RBP0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 FLVCR2Q9UPI3 526 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 ACOT9Q9Y305 439 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 MMACHCQ9Y4U1 282 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 INSIG2Q9Y5U4 225 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 ZNF780BQ9Y6R6 833 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 C2orf16Q68DN1 1984 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 SHANK1Q9Y566 2161 aa0.73□□□□□ -2.29
RNU6-440P-201ENST00000390882 KIF27Q86VH2 1401 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 IGLV10-54A0A075B6I4 117 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 LOC389332A0A1B0GUA5 103 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 GOLGA6L7A0A1B0GV03 622 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 A0A1W2PPV4 95 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 OR2AT4A6NND4 320 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 K7EPK0 472 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 K7ERS5 55 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 M0R1B8 84 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 UPK2O00526 184 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 RNF113AO15541 343 aaKnown RBP0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 PSCAO43653 123 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 COX7A2P2O60397 106 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 MBP02144 154 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 MLNP12872 115 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 TAC1P20366 129 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 IMPA1P29218 277 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 ARR3P36575 388 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 P2RY2P41231 377 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 SSX1Q16384 188 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 KRTAP6-3Q3LI67 103 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 HSP90AA4PQ58FG1 418 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 TTMPQ5BVD1 217 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 CLEC12AQ5QGZ9 265 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 IDNKQ5T6J7 187 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 CLEC19AQ6UXS0 136 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 Q6ZQT7 251 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 TMEM144Q7Z5S9 345 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 PRNTQ86SH4 94 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 SETD3Q86TU7 594 aaPredicted RBP0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 NELFCDQ8IXH7 590 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 CA13Q8N1Q1 262 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 EIF4E3Q8N5X7 224 aaKnown RBP0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 LINC00337Q8N6G1 96 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 CCNYL1Q8N7R7 359 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 BPIFB6Q8NFQ5 453 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 OR51L1Q8NGJ5 315 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 NDNFQ8TB73 568 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 UBA3Q8TBC4 463 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 NT5CQ8TCD5 201 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 KIAA1143Q96AT1 154 aaPredicted RBP0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 OTUB2Q96DC9 234 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 IGF2BP2-AS1Q96M15 143 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 ZNF75AQ96N20 296 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 C20orf144Q9BQM9 153 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 CHRNA10Q9GZZ6 450 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 SLC38A1Q9H2H9 487 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 FBXO44Q9H4M3 255 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 ASB7Q9H672 318 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 CYP3A43Q9HB55 503 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 RHOFQ9HBH0 211 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 CRLF2Q9HC73 371 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 C12orf4Q9NQ89 552 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 RPRD1BQ9NQG5 326 aaKnown RBP0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 NLE1Q9NVX2 485 aaPredicted RBP0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 RAB23Q9ULC3 237 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 AP3M1Q9Y2T2 418 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 KPTNQ9Y664 436 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 ICOSQ9Y6W8 199 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 VWA8A3KMH1 1905 aa0.72□□□□□ -2.29
RNU6-440P-201ENST00000390882 TMEM131Q92545 1883 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 SLC5A10A0PJK1 596 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 CD300LBA8K4G0 201 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 LEUTXA8MZ59 168 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 SEC14L6B5MCN3 397 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 GGTLC3B5MD39 225 aa0.71□□□□□ -2.3
RNU6-440P-201ENST00000390882 ISLRO14498 428 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms