RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 LIPFP07098 398 aa12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 DUX4L2P0CJ85 424 aa12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 DUX4L3P0CJ86 424 aa12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 DUX4L4P0CJ87 422 aa12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 DUX4L5P0CJ88 424 aa12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 DUX4L6P0CJ89 424 aa12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 DUX4L7P0CJ90 424 aa12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 BDKRB2P30411 391 aa12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 MAP2K4P45985 399 aa12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 PAX2Q02962 417 aa12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 DDI2Q5TDH0 399 aa12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 DUX4L9Q6RFH8 374 aaPredicted RBP12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 ZNF561Q8N587 486 aa12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 PNLDC1Q8NA58 520 aaKnown RBP12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 DACT3Q96B18 629 aaPredicted RBP12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 SDSLQ96GA7 329 aa12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 DERL3Q96Q80 235 aa12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 TMED9Q9BVK6 235 aa12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 DUX4Q9UBX2 424 aa12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 SLC25A10Q9UBX3 287 aaPredicted RBP12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 OR14J1Q9UGF5 321 aa12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 FOXJ3Q9UPW0 622 aa12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 AUP1Q9Y679 476 aa12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 ARHGAP32A7KAX9 2087 aa12.48□□□□□ -0.41
IGHV3-53-201ENST00000390627 KIR2DS1A0A191URI9 304 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 ANGPTL7O43827 346 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 GPX5O75715 221 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 KDM4BO94953 1096 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 INMTO95050 263 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 TMEM225BP0DP42 221 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 SELLP14151 372 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 IGFBP3P17936 291 aaPredicted RBP12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 BCL3P20749 454 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 PRDX2P32119 198 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 CAV3P56539 151 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 ZP1P60852 638 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 PAX8Q06710 450 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 SCGB2A2Q13296 93 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 TPBGQ13641 420 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 TRAM1Q15629 374 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 DGUOKQ16854 277 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 LIPKQ5VXJ0 399 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 BTN2A1Q7KYR7 527 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 SATL1Q86VE3 508 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 FAM58AQ8N1B3 248 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 TMEM185AQ8NFB2 350 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 OR52N4Q8NGI2 321 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 MGLLQ99685 303 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 ACOT13Q9NPJ3 140 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 RBFOX1Q9NWB1 397 aaKnown RBP12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 C2CD3Q4AC94 2353 aa12.47□□□□□ -0.41
IGHV3-53-201ENST00000390627 F8VVB4 439 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 F8VWA3 439 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 GABRPO00591 440 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 FCN3O75636 299 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 TFF1P04155 84 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 CHRM2P08172 466 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 CPEP16870 476 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 NDUFB7P17568 137 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 PRKACAP17612 351 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 PSMA1P25786 263 aaKnown RBP12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 ZNF93P35789 620 aaPredicted RBP12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 TGFBR2P37173 567 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 NPBWR2P48146 333 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 BMXP51813 675 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 CAPZA1P52907 286 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 ACSM3Q53FZ2 586 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 SPIN3Q5JUX0 258 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 CRIP3Q6Q6R5 217 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 RNF144BQ7Z419 303 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 C1QL2Q7Z5L3 287 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 CD177Q8N6Q3 437 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 ZNRF1Q8ND25 227 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 PXT1Q8NFP0 134 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 NANPQ8TBE9 248 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 TNFAIP8L1Q8WVP5 186 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 H1FXQ92522 213 aaKnown RBP12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 ORAI1Q96D31 301 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 POM121Q96HA1 1249 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 DMRTB1Q96MA1 342 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 FAM192AQ9GZU8 254 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 NOX4Q9NPH5 578 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 OPN4Q9UHM6 478 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 GLS2Q9UI32 602 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 RPUSD1Q9UJJ7 312 aaKnown RBP12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 LRRC42Q9Y546 428 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 MAB21L2Q9Y586 359 aa12.46□□□□□ -0.41
IGHV3-53-201ENST00000390627 TRAV8-7A0A075B6U6 113 aa12.45□□□□□ -0.42
IGHV3-53-201ENST00000390627 IGKV1-12A0A0C4DH73 117 aa12.45□□□□□ -0.42
IGHV3-53-201ENST00000390627 A0A1W2PPK0 400 aa12.45□□□□□ -0.42
IGHV3-53-201ENST00000390627 AVPP01185 164 aa12.45□□□□□ -0.42
IGHV3-53-201ENST00000390627 IFNA2P01563 188 aa12.45□□□□□ -0.42
IGHV3-53-201ENST00000390627 IGKV1D-12P01611 117 aa12.45□□□□□ -0.42
IGHV3-53-201ENST00000390627 PPIAL4GP0DN37 164 aa12.45□□□□□ -0.42
IGHV3-53-201ENST00000390627 CEBPDP49716 269 aaPredicted RBP12.45□□□□□ -0.42
IGHV3-53-201ENST00000390627 EMX1Q04741 257 aaPredicted RBP12.45□□□□□ -0.42
IGHV3-53-201ENST00000390627 ARMCX4Q5H9R4 360 aa12.45□□□□□ -0.42
IGHV3-53-201ENST00000390627 C1orf229Q6ZS94 237 aaPredicted RBP12.45□□□□□ -0.42
IGHV3-53-201ENST00000390627 PHC2Q8IXK0 858 aa12.45□□□□□ -0.42
IGHV3-53-201ENST00000390627 FGFRL1Q8N441 504 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 264.4 ms