RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 C17orf78Q8N4C9 275 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 PI4KAP1Q8N8J0 262 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 SPATA4Q8NEY3 305 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 ANKRD20A12PQ8NF67 263 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 OR4A16Q8NH70 328 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 CCL4L1Q8NHW4 92 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 FAM57AQ8TBR7 257 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 ZFAND1Q8TCF1 268 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 SLC7A13Q8TCU3 470 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 SFXN5Q8TD22 340 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 GIPC3Q8TF64 312 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 UBE2Q2Q8WVN8 375 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 PSMF1Q92530 271 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 RRP36Q96EU6 259 aaKnown RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 BSCL2Q96G97 398 aaPredicted RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 ERO1AQ96HE7 468 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 SH3YL1Q96HL8 342 aaPredicted RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 CDKN2AIPNLQ96HQ2 116 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 ADTRPQ96IZ2 230 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 LINC00615Q96LM1 132 aaPredicted RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 DRC1Q96MC2 740 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 ALS2CR12Q96Q35 445 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 TBX5Q99593 518 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 MTG1Q9BT17 334 aaPredicted RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 EIF5A2Q9GZV4 153 aaKnown RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 CLSTN2Q9H4D0 955 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 REEP4Q9H6H4 257 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 COPS7BQ9H9Q2 264 aaPredicted RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 XPNPEP1Q9NQW7 623 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 SLC2A9Q9NRM0 540 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 CDC42SE1Q9NRR8 79 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 SDAD1Q9NVU7 687 aaKnown RBP eCLIP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 THUMPD1Q9NXG2 353 aaKnown RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 IL36GQ9NZH8 169 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 AASSQ9UDR5 926 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 TAC3Q9UHF0 121 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 LAMP5Q9UJQ1 280 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 ANAPC7Q9UJX3 599 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 TNFSF18Q9UNG2 199 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 TFR2Q9UP52 801 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 FLVCR2Q9UPI3 526 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 AURKCQ9UQB9 309 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 TDRKHQ9Y2W6 561 aaKnown RBP-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 KNSTRNQ9Y448 316 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 LINC00588Q9Y4M8 146 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 PCDHGB3Q9Y5G1 929 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 COL4A5P29400 1685 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 CACNA1SQ13698 1873 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 SHANK3Q9BYB0 1731 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 ELP1O95163 1332 aa-0.7□□□□□ -2.52
TRAJ28-201ENST00000390509 MYOFQ9NZM1 2061 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 ARHGAP31Q2M1Z3 1444 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 DNAH10Q8IVF4 4471 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 PEAK1Q9H792 1746 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 TRBV6-8A0A0A6YYG3 113 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 IGHV3OR16-9A0A0B4J2B5 98 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 CCL15-CCL14A0A0B4J2E2 113 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 IGHV1-18A0A0C4DH31 117 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 hCG_1809904A0A1W2PP81 198 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 A0A1W2PPE2 198 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 A0A1W2PR64 198 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 IRGMA1A4Y4 181 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 FAM170AA1A519 330 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 A6NCN8 305 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 C5orf52A6NGY3 159 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 OR5H14A6NHG9 310 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 ARGFXA6NJG6 315 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 IBA57-AS1B1ANH7 110 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 E9PMD0 336 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 INMT-MINDY4F8WBC2 141 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 H7C1H1 209 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 AP3B1O00203 1094 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 CDC7O00311 574 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 BTN3A3O00478 584 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 SDCBPO00560 298 aaPredicted RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 RFXANKO14593 260 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 STX7O15400 261 aaKnown RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 AKR7A2O43488 359 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 ATP6V1G1O75348 118 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 IDH1O75874 414 aaKnown RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 PLEKHA8P1O95397 391 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 SOX14O95416 240 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 FGFR1OPO95684 399 aaKnown RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 CA1P00915 261 aaPredicted RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 RLN1P04808 185 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 GYPCP04921 128 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 HSP90AA1P07900 732 aaKnown RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 CD7P09564 240 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 IFIT2P09913 472 aaKnown RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 H2BFMP0C1H6 154 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 ZNF728P0DKX0 622 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 UQCRBP14927 111 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 POLR2EP19388 210 aaKnown RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 PRTN3P24158 256 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 IL3RAP26951 378 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 MARCKSP29966 332 aaPredicted RBP-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 GCH1P30793 250 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 GTF2H1P32780 548 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 FDFT1P37268 417 aa-0.71□□□□□ -2.52
TRAJ28-201ENST00000390509 CASP4P49662 377 aa-0.71□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms