RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 EXTL1Q92935 676 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 NTNG2Q96CW9 530 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 C3orf85A0A1B0GTC6 90 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 TGOLN2O43493 480 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 VAMP5O95183 116 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 ACKR3P25106 362 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 SURF2Q15527 256 aaPredicted RBP11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 ADAMTS17Q8TE56 1095 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 CA5BP1Q8WTZ4 195 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 RHOVQ96L33 236 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 CDH20Q9HBT6 801 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 GSN-AS1Q9NRJ2 163 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 NOSIPQ9Y314 301 aaKnown RBP11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 LOC285556D6RIA3 1793 aa11.6□□□□□ -0.55
TRAPPC9-201ENST00000389328 IGLV1-36A0A0B4J1U3 117 aa11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 K7EQS6 105 aa11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 SEC11BP0C7V7 166 aa11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 FUT3P21217 361 aa11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 UBE2NP61088 152 aaKnown RBP11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 EGR4Q05215 589 aa11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 OR1L3Q8NH93 324 aa11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 FAM234AQ9H0X4 552 aa11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 TSC2P49815 1807 aa11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 ASXL3Q9C0F0 2248 aa11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 PAX6P26367 422 aa11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 CD27P26842 260 aa11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 MPV17LQ2QL34 196 aa11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 Q6ZS52 159 aa11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 SLC39A7Q92504 469 aa11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 PACRGQ96M98 296 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 SLC2A9Q9NRM0 540 aa11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 PCOLCE2Q9UKZ9 415 aa11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 A0A096LPE4 126 aa11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 A0A1W2PPZ6 126 aa11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 HKR1P10072 659 aa11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 RAB31Q13636 194 aa11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 AQP10Q96PS8 301 aa11.59□□□□□ -0.55
TRAPPC9-201ENST00000389328 GEMIN2O14893 280 aaKnown RBP11.58□□□□□ -0.55
TRAPPC9-201ENST00000389328 DYNLT3P51808 116 aa11.58□□□□□ -0.55
TRAPPC9-201ENST00000389328 ERVK-16P61578 105 aa11.58□□□□□ -0.55
TRAPPC9-201ENST00000389328 VAX1Q5SQQ9 334 aa11.58□□□□□ -0.55
TRAPPC9-201ENST00000389328 LIAT1Q6ZQX7 453 aa11.58□□□□□ -0.55
TRAPPC9-201ENST00000389328 HEATR5BQ9P2D3 2071 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 ZNF320A2RRD8 509 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 XKRY2A2RUG3 117 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 BCAT2O15382 392 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 SPINK2P20155 84 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 ATP6V0CP27449 155 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 FOLR3P41439 243 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 EWSR1Q01844 656 aaKnown RBP eCLIP11.58□□□□□ -0.562e-6■■■■□ 21.2
TRAPPC9-201ENST00000389328 FBXO46Q6PJ61 603 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 ZNF808Q8N4W9 903 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 SPSB1Q96BD6 273 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 MCTS1Q9ULC4 181 aaKnown RBP11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 CARHSP1Q9Y2V2 147 aaKnown RBP11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 TIMM10BQ9Y5J6 103 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 AHCTF1Q8WYP5 2266 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 LOC101059948A0A1B0GTJ6 334 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 METTL15P1P0C7V9 234 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 KLK2P20151 261 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 CATR1Q13166 79 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 UBE2L5PA0A1B0GUS4 154 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 DEGS1O15121 323 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 CXCL13O43927 109 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 DXOO77932 396 aaKnown RBP11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 LYPD3O95274 346 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 CTXN2P0C2S0 81 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 P2RY1P47900 373 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 SUMO3P55854 103 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 FAM3AP98173 230 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 UBE2V2Q15819 145 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 SHISA5Q8N114 240 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 DMBX1Q8NFW5 382 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 GNRHR2Q96P88 292 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 UCK1Q9HA47 277 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 HDGFL3Q9Y3E1 203 aa11.58□□□□□ -0.56
TRAPPC9-201ENST00000389328 NKX2-6A6NCS4 301 aa11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 C17orf112F2Z3M2 114 aa11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 TNFSF11O14788 317 aa11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 PNLIPP16233 465 aa11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 PPP1CCP36873 323 aaKnown RBP11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 UBE2G2P60604 165 aa11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 ERVS71-1P61550 626 aa11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 ZNF154Q13106 437 aa11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 ENDOGQ14249 297 aaKnown RBP11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 C9orf40Q8IXQ3 194 aa11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 OR5AS1Q8N127 324 aa11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 FGF11Q92914 225 aa11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 MASP2O00187 686 aa11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 NXPH2O95156 264 aa11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 HOXC4P09017 264 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 MMP7P09237 267 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 KIR2DL1P43626 348 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 RPL29P47914 159 aaKnown RBP11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 RUNX1Q01196 453 aa11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 PMS2P11Q13670 270 aa11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 ZNF774Q6NX45 483 aa11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 ZNF574Q6ZN55 896 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 RPS19BP1Q86WX3 136 aaKnown RBP11.57□□□□□ -0.56
TRAPPC9-201ENST00000389328 CYB561D1Q8N8Q1 229 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms