RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 PEBP1P30086 187 aaKnown RBP-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 PCK1P35558 622 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 MTIF2P46199 727 aaKnown RBP-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 RPL5P46777 297 aaKnown RBP-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 HINT1P49773 126 aaPredicted RBP-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 CCR8P51685 355 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 RAB4BP61018 213 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 VAMP2P63027 116 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 DDX10Q13206 875 aaKnown RBP-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 BTN1A1Q13410 526 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 CUL2Q13617 745 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 CCL15Q16663 113 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 HYAL4Q2M3T9 481 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 TRMT5Q32P41 509 aaKnown RBP-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 TWISTNBQ3B726 338 aaPredicted RBP-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 PARP15Q460N3 678 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 TIMM23BQ5SRD1 257 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 C10orf55Q5SWW7 151 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 ZNF678Q5SXM1 525 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 GKAP1Q5VSY0 366 aaPredicted RBP-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 CFAP161Q6P656 301 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 Q6ZQY7 126 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 AKAP14Q86UN6 197 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 COMTD1Q86VU5 262 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 SKA3Q8IX90 412 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 TEX11Q8IYF3 940 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 SLC22A24Q8N4F4 322 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 C12orf29Q8N999 325 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 FER1L6-AS1Q8NA97 138 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 UBAC2Q8NBM4 344 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 SDR9C7Q8NEX9 313 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 NFKBIDQ8NI38 313 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 LINC01560Q8TB33 94 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 ACTRT1Q8TDG2 376 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 CDS1Q92903 461 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 MRPL24Q96A35 216 aaKnown RBP-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 TMEM186Q96B77 213 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 FLYWCH2Q96CP2 140 aaKnown RBP-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 RASD2Q96D21 266 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 VMP1Q96GC9 406 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 SLC35G5Q96KT7 338 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 XPO6Q96QU8 1125 aaKnown RBP-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 PARK7Q99497 189 aaKnown RBP-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 GPR63Q9BZJ6 419 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 NACAP1Q9BZK3 213 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 NAT10Q9H0A0 1025 aaKnown RBP-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 SIRPDQ9H106 197 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 RNASE7Q9H1E1 156 aaKnown RBP-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR51I1Q9H343 314 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 CST9LQ9H4G1 147 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 ACP6Q9NPH0 428 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 UFSP2Q9NUQ7 469 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 ACOXLQ9NUZ1 547 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 ARHGEF38Q9NXL2 777 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 ZNF492Q9P255 531 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 GIMAP2Q9UG22 337 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 RWDD2AQ9UIY3 292 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 ENPP5Q9UJA9 477 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 ANAPC5Q9UJX4 755 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 CPSF3Q9UKF6 684 aaKnown RBP-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 CRYL1Q9Y2S2 319 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 RRP15Q9Y3B9 282 aaKnown RBP-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 TBL2Q9Y4P3 447 aaKnown RBP-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 COL4A3BPQ9Y5P4 624 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 MAD1L1Q9Y6D9 718 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 LRP5O75197 1615 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 DISP1Q96F81 1524 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 SPTBP11277 2137 aa-1.82□□□□□ -2.7
RNU6-540P-201ENST00000384622 NSD3Q9BZ95 1437 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 MYH7BA7E2Y1 1941 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 TRBV6-8A0A0A6YYG3 113 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 IGHV3-66A0A0C4DH42 116 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 TEX49A0A1B0GTD5 131 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 RAB19A4D1S5 217 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR2A25A4D2G3 310 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 C5orf51A6NDU8 294 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 TRIM64BA6NI03 449 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 LRRC72A6NJI9 287 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 C11orf98E9PRG8 122 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 F2Z2F3 143 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 H0YC42 278 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 C15orf65H3BRN8 121 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 CLDN34H7C241 214 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 J3QT63 122 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 UBE2CO00762 179 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 TOX3O15405 576 aaPredicted RBP-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 PPIHO43447 177 aaKnown RBP-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 PFKFB2O60825 505 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 NIPSNAP2O75323 286 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 UPK3AO75631 287 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 SCO1O75880 301 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 GLCEO94923 617 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 H6PDO95479 791 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 CXCL14O95715 111 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 PTBP3O95758 552 aaKnown RBP-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 IGHG4P01861 327 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 RLN1P04808 185 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 OR4Q2P0C623 313 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 COX8AP10176 69 aa-1.83□□□□□ -2.7
RNU6-540P-201ENST00000384622 ALPPL2P10696 532 aa-1.83□□□□□ -2.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms