RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 KIAA1456Q9P272 454 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 OR51B4Q9Y5P0 310 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 GTF3C1Q12789 2109 aa8.25□□□□□ -1.09
PTPRA-204ENST00000380393 PLXND1Q9Y4D7 1925 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 H3BSH0 61 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 FURINP09958 794 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 GNB3P16520 340 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 CD1BP29016 333 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 SLC6A8P48029 635 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 GFRA1P56159 465 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 TPPP2P59282 170 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 POM121L1PQ3SYA9 428 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 EIPR1Q53HC9 387 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 LRRC69Q6ZNQ3 347 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 VASH2Q86V25 355 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 CADM4Q8NFZ8 388 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 OR2Y1Q8NGV0 311 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 PTPMT1Q8WUK0 201 aaPredicted RBP8.24□□□□□ -1.09
PTPRA-204ENST00000380393 SPSB1Q96BD6 273 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 IMMP2LQ96T52 175 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 A4GALTQ9NPC4 353 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 TMEM38BQ9NVV0 291 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 FLRT3Q9NZU0 649 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 PATJQ8NI35 1801 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 CACNA1CQ13936 2221 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 USP34Q70CQ2 3546 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 OR2T8A6NH00 312 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 H7BYZ3 331 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 GPR137BO60478 399 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 STATHP02808 62 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 KLKB1P03952 638 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 RPS4Y1P22090 263 aaKnown RBP8.24□□□□□ -1.09
PTPRA-204ENST00000380393 B4GALNT1Q00973 533 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 BAXQ07812 192 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 ACTL10Q5JWF8 245 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 SLC38A9Q8NBW4 561 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 OR4P4Q8NGL7 312 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 SLAMF6Q96DU3 332 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 DCBLD2Q96PD2 775 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 CTDSP1Q9GZU7 261 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 BRWD1Q9NSI6 2320 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 A0A1B0GW15 77 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 HSPB2A8KAH6 182 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 TNFSF12O43508 249 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 FBXO45P0C2W1 286 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 ESDP10768 282 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 ZNF708P17019 499 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 TSPOP30536 169 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 PTGER4P35408 488 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 TAS2R31P59538 309 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 HSPB2Q16082 182 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 FAM78AQ5JUQ0 283 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 LCN10Q6JVE6 187 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 TMEM156Q8N614 296 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 MARCH1Q8TCQ1 289 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 MRGPRFQ96AM1 343 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 ABHD6Q9BV23 337 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 MBNL1Q9NR56 388 aaKnown RBP8.24□□□□□ -1.09
PTPRA-204ENST00000380393 LHX3Q9UBR4 397 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 SERTAD3Q9UJW9 196 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 LSM5Q9Y4Y9 91 aaKnown RBP8.24□□□□□ -1.09
PTPRA-204ENST00000380393 COL4A6Q14031 1691 aa8.24□□□□□ -1.09
PTPRA-204ENST00000380393 GLOD5A6NK44 160 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 HIDE1A8MVS5 230 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 TRAPPC2LH3BP13 241 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 SEMA4FO95754 770 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 PFN1P07737 140 aaKnown RBP8.23□□□□□ -1.09
PTPRA-204ENST00000380393 SERPINA4P29622 427 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 BCL6P41182 706 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 UBE2NP61088 152 aaKnown RBP8.23□□□□□ -1.09
PTPRA-204ENST00000380393 PLPPR5Q32ZL2 321 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 FAM71F2Q6NXP2 309 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 CLEC18BQ6UXF7 455 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 WBP2Q969T9 261 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 LINC00615Q96LM1 132 aaPredicted RBP8.23□□□□□ -1.09
PTPRA-204ENST00000380393 LRFN3Q9BTN0 628 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 HDAC8Q9BY41 377 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 OR52D1Q9H346 318 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 MRPL27Q9P0M9 148 aaKnown RBP8.23□□□□□ -1.09
PTPRA-204ENST00000380393 K7N7A8 449 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 CSNK1A1P48729 337 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 SRPXP78539 464 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 SMAD3P84022 425 aaKnown RBP8.23□□□□□ -1.09
PTPRA-204ENST00000380393 SPEM2Q0P670 501 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 SLC16A9Q7RTY1 509 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 POC1AQ8NBT0 407 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 CXorf40BQ96DE9 158 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 ZMYND19Q96E35 227 aaPredicted RBP8.23□□□□□ -1.09
PTPRA-204ENST00000380393 ADOQ96SZ5 270 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 PYGO2Q9BRQ0 406 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 HELZP42694 1942 aaKnown RBP8.23□□□□□ -1.09
PTPRA-204ENST00000380393 ARID1BQ8NFD5 2236 aaPredicted RBP8.23□□□□□ -1.09
PTPRA-204ENST00000380393 NRG2O14511 850 aaPredicted RBP8.23□□□□□ -1.09
PTPRA-204ENST00000380393 LINC00271P0C7V0 271 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 LAMP2P13473 410 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 TCN2P20062 427 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 GALR1P47211 349 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 PRDX4Q13162 271 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 ELOA3BQ3SY89 546 aa8.23□□□□□ -1.09
PTPRA-204ENST00000380393 SLC8B1Q6J4K2 584 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms