RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 GALNT16Q8N428 558 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 OR11H7Q8NGC8 314 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 OR2V1Q8NHB1 315 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 RAB40AQ8WXH6 277 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 MRI1Q9BV20 369 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 CHST6Q9GZX3 395 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 NELFAQ9H3P2 528 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 ABI3Q9P2A4 366 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 BOKQ9UMX3 212 aaPredicted RBP9.45□□□□□ -0.9
NEDD9-201ENST00000379433 FLVCR1Q9Y5Y0 555 aa9.45□□□□□ -0.9
NEDD9-201ENST00000379433 IGLV3-32A0A0A0MS00 114 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 PYCARD-AS1I3L0S3 204 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 PMS2P2O95744 297 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 PSMB1P20618 241 aaKnown RBP9.44□□□□□ -0.9
NEDD9-201ENST00000379433 ACHEP22303 614 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 NPY4RP50391 375 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 MMP16P51512 607 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 KIAA2026Q5HYC2 2103 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 TSPO2Q5TGU0 170 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 FAM219AQ8IW50 185 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 CCDC107Q8WV48 283 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 TPPP3Q9BW30 176 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 GPR87Q9BY21 358 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 TTTY12Q9BZ98 90 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 METTL17Q9H7H0 456 aaPredicted RBP9.44□□□□□ -0.9
NEDD9-201ENST00000379433 LIPGQ9Y5X9 500 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 XRCC3O43542 346 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 RBMXL2O75526 392 aaKnown RBP9.44□□□□□ -0.9
NEDD9-201ENST00000379433 FCGR2AP12318 317 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 MUC1P15941 1255 aaPredicted RBP9.44□□□□□ -0.9
NEDD9-201ENST00000379433 PPIAP62937 165 aaKnown RBP9.44□□□□□ -0.9
NEDD9-201ENST00000379433 H3F3AP84243 136 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 SNTB1Q13884 538 aaKnown RBP9.44□□□□□ -0.9
NEDD9-201ENST00000379433 OVCH2Q7RTZ1 564 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 C1QL2Q7Z5L3 287 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 GGNQ86UU5 652 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 C20orf196Q8IYI0 205 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 GJC3Q8NFK1 279 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 RBPMSQ93062 196 aaKnown RBP9.44□□□□□ -0.9
NEDD9-201ENST00000379433 S100A13Q99584 98 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 PARPBPQ9NWS1 579 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 ZNF230Q9UIE0 474 aaPredicted RBP9.44□□□□□ -0.9
NEDD9-201ENST00000379433 A0A087WZY1 265 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 SPRY1O43609 319 aaPredicted RBP9.44□□□□□ -0.9
NEDD9-201ENST00000379433 GABRR1P24046 479 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 MEOX1P50221 254 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 PSMA6P60900 246 aaKnown RBP9.44□□□□□ -0.9
NEDD9-201ENST00000379433 MRPS11P82912 194 aaKnown RBP9.44□□□□□ -0.9
NEDD9-201ENST00000379433 MAB21L1Q13394 359 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 IGFBP7Q16270 282 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 LRRC37A5PQ49AS3 106 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 ANKRD16Q6P6B7 361 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 TMEM251Q8N6I4 163 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 OR5M9Q8NGP3 310 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 HAVCR2Q8TDQ0 301 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 OBP2BQ9NPH6 170 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 GFOD1Q9NXC2 390 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 COL12A1Q99715 3063 aa9.44□□□□□ -0.9
NEDD9-201ENST00000379433 DIDO1Q9BTC0 2240 aaKnown RBP9.44□□□□□ -0.9
NEDD9-201ENST00000379433 GJE1A6NN92 205 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 CYB5AP00167 134 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 PI3P19957 117 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 B3GALT5-AS1P59052 145 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 ARFRP1Q13795 201 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 ENDOGQ14249 297 aaKnown RBP9.43□□□□□ -0.9
NEDD9-201ENST00000379433 OR2T35Q8NGX2 323 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 RPS4Y2Q8TD47 263 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 TNFAIP8L1Q8WVP5 186 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 SORCS2Q96PQ0 1159 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 SLC6A7Q99884 636 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 ST6GALNAC5Q9BVH7 336 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 NIPAL2Q9H841 368 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 NAGKQ9UJ70 344 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 MRPS28Q9Y2Q9 187 aaKnown RBP9.43□□□□□ -0.9
NEDD9-201ENST00000379433 COL5A1P20908 1838 aaPredicted RBP9.43□□□□□ -0.9
NEDD9-201ENST00000379433 ZZEF1O43149 2961 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 GTF3C1Q12789 2109 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 CXorf65A6NEN9 183 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 H0Y8G0 127 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 TCF21O43680 179 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 TMEM225BP0DP42 221 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 CLINT1Q14677 625 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 HLXQ14774 488 aaPredicted RBP9.43□□□□□ -0.9
NEDD9-201ENST00000379433 NCR3LG1Q68D85 454 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 NHLRC1Q6VVB1 395 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 ADGRE4PQ86SQ3 457 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 CASTOR1Q8WTX7 329 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 BOD1Q96IK1 185 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 CMSS1Q9BQ75 279 aaKnown RBP9.43□□□□□ -0.9
NEDD9-201ENST00000379433 ZNF2Q9BSG1 426 aaPredicted RBP9.43□□□□□ -0.9
NEDD9-201ENST00000379433 UPB1Q9UBR1 384 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 B4GALT7Q9UBV7 327 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 PCSK5Q92824 1860 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 A0A1B0GTI1 187 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 C9orf170A2RU37 121 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 SOCS1O15524 211 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 ZNF883P0CG24 379 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 VSIG8P0DPA2 414 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 CNR1P21554 472 aa9.43□□□□□ -0.9
NEDD9-201ENST00000379433 GSG1Q2KHT4 349 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms