RNA–Protein interactions for RNA: ENST00000378512.5

RER1-202, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 1 (best) BASIC

Gene RER1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-202ENST00000378512 GTF2A1P52655 376 aaPredicted RBP13.96□□□□□ -0.18
RER1-202ENST00000378512 SLC34A1Q06495 639 aa13.96□□□□□ -0.18
RER1-202ENST00000378512 CDK5R1Q15078 307 aa13.96□□□□□ -0.18
RER1-202ENST00000378512 RPL22L1Q6P5R6 122 aaKnown RBP13.96□□□□□ -0.18
RER1-202ENST00000378512 RBMS3Q6XE24 437 aaKnown RBP13.96□□□□□ -0.18
RER1-202ENST00000378512 SLC25A26Q70HW3 274 aa13.96□□□□□ -0.18
RER1-202ENST00000378512 VMO1Q7Z5L0 202 aa13.96□□□□□ -0.18
RER1-202ENST00000378512 Q8IYB0 196 aa13.96□□□□□ -0.18
RER1-202ENST00000378512 C8orf59Q8N0T1 100 aaPredicted RBP13.96□□□□□ -0.18
RER1-202ENST00000378512 RGP1Q92546 391 aaPredicted RBP13.96□□□□□ -0.18
RER1-202ENST00000378512 GGHQ92820 318 aa13.96□□□□□ -0.18
RER1-202ENST00000378512 OPALINQ96PE5 141 aa13.96□□□□□ -0.18
RER1-202ENST00000378512 CNOT2Q9NZN8 540 aaKnown RBP13.96□□□□□ -0.18
RER1-202ENST00000378512 EXOSC1Q9Y3B2 195 aaKnown RBP13.96□□□□□ -0.18
RER1-202ENST00000378512 PKD1L1Q8TDX9 2849 aa13.96□□□□□ -0.18
RER1-202ENST00000378512 TRRAPQ9Y4A5 3859 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 TRBV2A0A0J9YWF9 115 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 K7N7A8 449 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 SLC1A7O00341 560 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 OGG1O15527 345 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 ZNF737O75373 536 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 HKR1P10072 659 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 NDUFB7P17568 137 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 CEBPDP49716 269 aaPredicted RBP13.95□□□□□ -0.18
RER1-202ENST00000378512 PDZK1IP1Q13113 114 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 BAMBIQ13145 260 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 DEFB112Q30KQ8 113 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 OR2G6Q5TZ20 316 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 RUSC1-AS1Q66K80 236 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 ASPHD2Q6ICH7 369 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 SERPINA12Q8IW75 414 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 MKXQ8IYA7 352 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 CMTM4Q8IZR5 234 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 TMEM185AQ8NFB2 350 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 OR52N1Q8NH53 320 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 NRG4Q8WWG1 115 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 GATAD2BQ8WXI9 593 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 H1FXQ92522 213 aaKnown RBP13.95□□□□□ -0.18
RER1-202ENST00000378512 LHX4Q969G2 390 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 SLAMF9Q96A28 289 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 TMEM80Q96HE8 168 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 COMMD4Q9H0A8 199 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 ZCCHC4Q9H5U6 513 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 ELL3Q9HB65 397 aaPredicted RBP13.95□□□□□ -0.18
RER1-202ENST00000378512 CLEC2DQ9UHP7 191 aa13.95□□□□□ -0.18
RER1-202ENST00000378512 LALBAP00709 142 aa13.94□□□□□ -0.18
RER1-202ENST00000378512 TK1P04183 234 aa13.94□□□□□ -0.18
RER1-202ENST00000378512 RNASE1P07998 156 aaKnown RBP13.94□□□□□ -0.18
RER1-202ENST00000378512 NPBWR2P48146 333 aa13.94□□□□□ -0.18
RER1-202ENST00000378512 MTCP1P56278 107 aa13.94□□□□□ -0.18
RER1-202ENST00000378512 ZNF146Q15072 292 aa13.94□□□□□ -0.18
RER1-202ENST00000378512 SLC9A3R2Q15599 337 aa13.94□□□□□ -0.18
RER1-202ENST00000378512 Q6YL49 198 aa13.94□□□□□ -0.18
RER1-202ENST00000378512 TMPRSS11AQ6ZMR5 421 aa13.94□□□□□ -0.18
RER1-202ENST00000378512 RNF144BQ7Z419 303 aa13.94□□□□□ -0.18
RER1-202ENST00000378512 PIP4P2Q8N4L2 257 aa13.94□□□□□ -0.18
RER1-202ENST00000378512 C11orf42Q8N5U0 333 aa13.94□□□□□ -0.18
RER1-202ENST00000378512 NOX4Q9NPH5 578 aa13.94□□□□□ -0.18
RER1-202ENST00000378512 FKBP14Q9NWM8 211 aa13.94□□□□□ -0.18
RER1-202ENST00000378512 BABAM2Q9NXR7 383 aa13.94□□□□□ -0.18
RER1-202ENST00000378512 ONECUT1Q9UBC0 465 aa13.94□□□□□ -0.18
RER1-202ENST00000378512 PSORS1C1Q9UIG5 152 aa13.94□□□□□ -0.18
RER1-202ENST00000378512 SIRT4Q9Y6E7 314 aaPredicted RBP13.94□□□□□ -0.18
RER1-202ENST00000378512 IGKV1-12A0A0C4DH73 117 aa13.93□□□□□ -0.18
RER1-202ENST00000378512 RNASEK-C17orf49H0YIS7 233 aa13.93□□□□□ -0.18
RER1-202ENST00000378512 WIPF1O43516 503 aa13.93□□□□□ -0.18
RER1-202ENST00000378512 IGKV1D-12P01611 117 aa13.93□□□□□ -0.18
RER1-202ENST00000378512 CHRM2P08172 466 aa13.93□□□□□ -0.18
RER1-202ENST00000378512 ST3GAL4Q11206 333 aa13.93□□□□□ -0.18
RER1-202ENST00000378512 SAXO1Q8IYX7 474 aa13.93□□□□□ -0.18
RER1-202ENST00000378512 BATF2Q8N1L9 274 aa13.93□□□□□ -0.18
RER1-202ENST00000378512 OR5D14Q8NGL3 314 aa13.93□□□□□ -0.18
RER1-202ENST00000378512 OR13C9Q8NGT0 318 aa13.93□□□□□ -0.18
RER1-202ENST00000378512 SMIM19Q96E16 107 aa13.93□□□□□ -0.18
RER1-202ENST00000378512 VCXQ9H320 206 aa13.93□□□□□ -0.18
RER1-202ENST00000378512 METTL8Q9H825 291 aaKnown RBP13.93□□□□□ -0.18
RER1-202ENST00000378512 RHOFQ9HBH0 211 aa13.93□□□□□ -0.18
RER1-202ENST00000378512 C19orf12Q9NSK7 152 aa13.93□□□□□ -0.18
RER1-202ENST00000378512 MGAM2Q2M2H8 2515 aa13.93□□□□□ -0.18
RER1-202ENST00000378512 EFCAB10A6NFE3 127 aa13.92□□□□□ -0.18
RER1-202ENST00000378512 SULT1B1O43704 296 aa13.92□□□□□ -0.18
RER1-202ENST00000378512 KDM4BO94953 1096 aa13.92□□□□□ -0.18
RER1-202ENST00000378512 MYL12AP19105 171 aa13.92□□□□□ -0.18
RER1-202ENST00000378512 ZP1P60852 638 aa13.92□□□□□ -0.18
RER1-202ENST00000378512 COL10A1Q03692 680 aa13.92□□□□□ -0.18
RER1-202ENST00000378512 DMKNQ6E0U4 476 aaPredicted RBP13.92□□□□□ -0.18
RER1-202ENST00000378512 RBFOX1Q9NWB1 397 aaKnown RBP13.92□□□□□ -0.18
RER1-202ENST00000378512 IL36RNQ9UBH0 155 aa13.92□□□□□ -0.18
RER1-202ENST00000378512 OR14J1Q9UGF5 321 aa13.92□□□□□ -0.18
RER1-202ENST00000378512 DHDHQ9UQ10 334 aa13.92□□□□□ -0.18
RER1-202ENST00000378512 XPNPEP2O43895 674 aa13.91□□□□□ -0.18
RER1-202ENST00000378512 BCL3P20749 454 aa13.91□□□□□ -0.18
RER1-202ENST00000378512 RPL31P62899 125 aaKnown RBP13.91□□□□□ -0.18
RER1-202ENST00000378512 GUCA2AQ02747 115 aa13.91□□□□□ -0.18
RER1-202ENST00000378512 SPIN3Q5JUX0 258 aa13.91□□□□□ -0.18
RER1-202ENST00000378512 TMEM200BQ69YZ2 307 aa13.91□□□□□ -0.18
RER1-202ENST00000378512 HCP5Q6MZN7 132 aa13.91□□□□□ -0.18
RER1-202ENST00000378512 C17orf107Q6ZR85 190 aa13.91□□□□□ -0.18
RER1-202ENST00000378512 LDLRAD3Q86YD5 345 aa13.91□□□□□ -0.18
RER1-202ENST00000378512 FAM58AQ8N1B3 248 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms