RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 STUMQ69YW2 141 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 THNSL2Q86YJ6 484 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 TMEM105Q8N8V8 129 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 OR1F12Q8NHA8 337 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 TMPRSS5Q9H3S3 457 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 SLC25A19Q9HC21 320 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 ZNF320A2RRD8 509 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 PPP1CBP62140 327 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 GTF2H5Q6ZYL4 71 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 CSRP1P21291 193 aaKnown RBP9.62□□□□□ -0.87
HIF3A-205ENST00000377670 TMEM268Q5VZI3 342 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 C11orf87Q6NUJ2 197 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 OR5B3Q8NH48 314 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 SMIM4Q8WVI0 70 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 KTI12Q96EK9 354 aaPredicted RBP9.62□□□□□ -0.87
HIF3A-205ENST00000377670 UCK1Q9HA47 277 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 PLEKHA2Q9HB19 425 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 C20orf141Q9NUB4 165 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 LIPGQ9Y5X9 500 aa9.62□□□□□ -0.87
HIF3A-205ENST00000377670 hADV38S2A0JD32 116 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 EPXP11678 715 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 MEOX2P50222 304 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 LHX4Q969G2 390 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 RBM38Q9H0Z9 239 aaKnown RBP9.61□□□□□ -0.87
HIF3A-205ENST00000377670 A4GNTQ9UNA3 340 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 PPP1R3CQ9UQK1 317 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 IAPPP10997 89 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 RAB5AP20339 215 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 PAX6P26367 422 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 SMUG1Q53HV7 270 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 LRRC29Q8WV35 223 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 CMBLQ96DG6 245 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 RASL11BQ9BPW5 248 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 NDFIP1Q9BT67 221 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 FGF20Q9NP95 211 aaPredicted RBP9.61□□□□□ -0.87
HIF3A-205ENST00000377670 GNG10P50151 68 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 HLXQ14774 488 aaPredicted RBP9.61□□□□□ -0.87
HIF3A-205ENST00000377670 WDR31Q8NA23 367 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 YAE1D1Q9NRH1 226 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 PRSS37A4D1T9 235 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 C3orf80F5H4A9 247 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 IGHV4-34P06331 123 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 GALNSP34059 522 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 GPM6AP51674 278 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 HNRNPA3P51991 378 aaKnown RBP9.61□□□□□ -0.87
HIF3A-205ENST00000377670 UBE2G1P62253 170 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 OR6S1Q8NH40 331 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 RASL10BQ96S79 203 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 MAGT1Q9H0U3 335 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 GPR84Q9NQS5 396 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 PLEKHB1Q9UF11 243 aaPredicted RBP9.61□□□□□ -0.87
HIF3A-205ENST00000377670 TMEFF2Q9UIK5 374 aaPredicted RBP9.61□□□□□ -0.87
HIF3A-205ENST00000377670 GPANK1O95872 356 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 KDF1Q8NAX2 398 aaPredicted RBP9.61□□□□□ -0.87
HIF3A-205ENST00000377670 TMEM104Q8NE00 496 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 OR5D13Q8NGL4 314 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 SAP25Q8TEE9 199 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 BCL2L10Q9HD36 194 aa9.61□□□□□ -0.87
HIF3A-205ENST00000377670 A0A1W2PPV9 198 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 FAM221AA4D161 298 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 ARRDC5A6NEK1 342 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 ZNF785A8K8V0 405 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 FGF7P21781 194 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 UBE3DQ7Z6J8 389 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 SLC38A9Q8NBW4 561 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 ZNF485Q8NCK3 441 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 OR2T6Q8NHC8 308 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 PCGF1Q9BSM1 259 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 ZDHHC11Q9H8X9 412 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 CCL27Q9Y4X3 112 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 AQP7P3A6NL99 342 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 FAM157AC9JC47 383 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 WNT1P04628 370 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 C21orf62-AS1Q17RA5 79 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 OR2B11Q5JQS5 317 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 MAMSTRQ6ZN01 415 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 SLC16A12Q6ZSM3 486 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 SLC25A26Q70HW3 274 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 SYS1Q8N2H4 156 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 LINC00052Q96N35 136 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 VAMP8Q9BV40 100 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 NMES1Q9C002 83 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 C1RLQ9NZP8 487 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 CHEK1O14757 476 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 DTYMKP23919 212 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 OR2W3Q7Z3T1 314 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 Q8IYB0 196 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 NUBPLQ8TB37 319 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 PECRQ9BY49 303 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 ACTR3CQ9C0K3 210 aaPredicted RBP9.6□□□□□ -0.87
HIF3A-205ENST00000377670 DLL4Q9NR61 685 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 MMP26Q9NRE1 261 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 SLC22A13Q9Y226 551 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 ANK1P16157 1881 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 LEUTXA8MZ59 168 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 GPR31O00270 319 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 TPPP2P59282 170 aa9.6□□□□□ -0.87
HIF3A-205ENST00000377670 RANP62826 216 aaKnown RBP9.6□□□□□ -0.87
HIF3A-205ENST00000377670 LSM11P83369 360 aaKnown RBP eCLIP9.6□□□□□ -0.87
HIF3A-205ENST00000377670 MIDNQ504T8 468 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms