RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 PRELID1Q9Y255 219 aa10.18□□□□□ -0.78
TNFRSF9-201ENST00000377507 KCNIP3Q9Y2W7 256 aa10.18□□□□□ -0.78
TNFRSF9-201ENST00000377507 AMDHD2Q9Y303 409 aa10.18□□□□□ -0.78
TNFRSF9-201ENST00000377507 WDFY3Q8IZQ1 3526 aa10.18□□□□□ -0.78
TNFRSF9-201ENST00000377507 ZNF850A8MQ14 1090 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 LRP3O75074 770 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 JTBO76095 146 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 PLATP00750 562 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 SERPINA7P05543 415 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 ZNF728P0DKX0 622 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 OPRM1P35372 400 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 CAV2P51636 162 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 FOXO1Q12778 655 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 SSPNQ14714 243 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 DAZAP2Q15038 168 aaPredicted RBP10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 WIPI1Q5MNZ9 446 aaPredicted RBP10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 DCAF12Q5T6F0 453 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 OR2A2Q6IF42 318 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 FAM219AQ8IW50 185 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 FBXL14Q8N1E6 418 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 LYPD6BQ8NI32 183 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 PSMF1Q92530 271 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 CPNE4Q96A23 557 aaPredicted RBP10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 MARS2Q96GW9 593 aaKnown RBP10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 C18orf12Q96KH6 178 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 SUCNR1Q9BXA5 334 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 C1QTNF5Q9BXJ0 243 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 PRDM14Q9GZV8 571 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 TLNRD1Q9H1K6 362 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 ARV1Q9H2C2 271 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 PLEKHA2Q9HB19 425 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 OR2S2Q9NQN1 319 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 PLA2G2EQ9NZK7 142 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 ATPIF1Q9UII2 106 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 SDK2Q58EX2 2172 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 IGKV3D-15A0A087WSY6 115 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 ZNF816-ZNF321PA0A0X1KG74 233 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 F8W036 122 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 H7C1Q1 480 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 LINC01387J3KSC0 135 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 XRCC2O43543 280 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 ACP1P24666 158 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 RPS18P62269 152 aaKnown RBP10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 BLOC1S1P78537 153 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 PIGYQ3MUY2 71 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 DHRS7BQ6IAN0 325 aaPredicted RBP10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 TMEM211Q6ICI0 200 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 BTNL8Q6UX41 500 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 SPAG16Q8N0X2 631 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 RTN4IP1Q8WWV3 396 aaPredicted RBP10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 MOB3AQ96BX8 217 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 RHOFQ9HBH0 211 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 PARP11Q9NR21 331 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 SLC7A11Q9UPY5 501 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 ST3GAL6Q9Y274 331 aa10.17□□□□□ -0.78
TNFRSF9-201ENST00000377507 COL27A1Q8IZC6 1860 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 PINLYPA6NC86 204 aa10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 PDCD6O75340 191 aa10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 PDGFBP01127 241 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 CD5P06127 495 aa10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 EDN3P14138 238 aa10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 TCN2P20062 427 aa10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 FCGR2CP31995 323 aa10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 OTX2P32243 289 aa10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 LPAR6P43657 344 aa10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 CYB561P49447 251 aa10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 PRSS12P56730 875 aa10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 TMEM33P57088 247 aa10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 SMCO1Q147U7 214 aa10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 Q6ZPA2 131 aa10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 ESX1Q8N693 406 aa10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 UBAC2Q8NBM4 344 aa10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 SLC39A7Q92504 469 aa10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 MSI2Q96DH6 328 aaKnown RBP10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 CDX2Q99626 313 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 PLSCR2Q9NRY7 297 aa10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 RCC2Q9P258 522 aaKnown RBP10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 FBXL17Q9UF56 701 aa10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 NDRG3Q9UGV2 375 aa10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 NCKAP5O14513 1909 aa10.16□□□□□ -0.78
TNFRSF9-201ENST00000377507 E5RGE8 158 aa10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 ZNF587BE7ETH6 402 aa10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 NDUFA2O43678 99 aa10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 TRAPPC6AO75865 159 aa10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 TSPAN9O75954 239 aa10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 MBPP02686 304 aaPredicted RBP10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 OR5AC1P0C628 307 aa10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 RCC1P18754 421 aaPredicted RBP10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 RBM11P57052 281 aaKnown RBP10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 C6orf15Q6UXA7 325 aaPredicted RBP10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 DBX2Q6ZNG2 339 aa10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 LIAT1Q6ZQX7 453 aa10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 Q6ZS49 121 aa10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 TIPARPQ7Z3E1 657 aaKnown RBP10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 CPEB3Q8NE35 698 aaKnown RBP10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 ABHD3Q8WU67 409 aa10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 ZNF845Q96IR2 970 aaPredicted RBP10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 NRIP2Q9BQI9 281 aa10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 RSRP1Q9BUV0 290 aa10.15□□□□□ -0.78
TNFRSF9-201ENST00000377507 LINC00470Q9BZP3 86 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms