RNA–Protein interactions for RNA: ENST00000376709.8

VSX1-202, Transcript of visual system homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VSX1, Length 2,192 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-202ENST00000376709 ECI1P42126 302 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 BEX5Q5H9J7 111 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 INO80EQ8NBZ0 244 aaPredicted RBP17.46■□□□□ 0.39
VSX1-202ENST00000376709 LRRC20Q8TCA0 184 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 DYRK2Q92630 601 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 RBPMSQ93062 196 aaKnown RBP17.46■□□□□ 0.39
VSX1-202ENST00000376709 RAB18Q9NP72 206 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 MBD2Q9UBB5 411 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 PRSS50Q9UI38 385 aa17.46■□□□□ 0.39
VSX1-202ENST00000376709 PRRC2CQ9Y520 2896 aaKnown RBP17.45■□□□□ 0.38
VSX1-202ENST00000376709 MSTNO14793 375 aa17.45■□□□□ 0.38
VSX1-202ENST00000376709 ADAP1O75689 374 aa17.45■□□□□ 0.38
VSX1-202ENST00000376709 CALCRP30988 508 aa17.45■□□□□ 0.38
VSX1-202ENST00000376709 UBA52P62987 128 aaKnown RBP17.45■□□□□ 0.38
VSX1-202ENST00000376709 ANKRD55Q3KP44 614 aa17.45■□□□□ 0.38
VSX1-202ENST00000376709 RNFT1Q5M7Z0 435 aa17.45■□□□□ 0.38
VSX1-202ENST00000376709 WDYHV1Q96HA8 205 aa17.45■□□□□ 0.38
VSX1-202ENST00000376709 NARFLQ9H6Q4 476 aa17.45■□□□□ 0.38
VSX1-202ENST00000376709 URB1O60287 2271 aaKnown RBP17.45■□□□□ 0.38
VSX1-202ENST00000376709 CNOT1A5YKK6 2376 aaKnown RBP17.45■□□□□ 0.38
VSX1-202ENST00000376709 A0A0B4J2A0 478 aa17.45■□□□□ 0.38
VSX1-202ENST00000376709 RNF222A6NCQ9 220 aa17.45■□□□□ 0.38
VSX1-202ENST00000376709 SLC22A20A6NK97 555 aa17.45■□□□□ 0.38
VSX1-202ENST00000376709 OR5H8P0DN80 308 aa17.45■□□□□ 0.38
VSX1-202ENST00000376709 RBM11P57052 281 aaKnown RBP17.45■□□□□ 0.38
VSX1-202ENST00000376709 PRDX4Q13162 271 aa17.45■□□□□ 0.38
VSX1-202ENST00000376709 BATF2Q8N1L9 274 aa17.45■□□□□ 0.38
VSX1-202ENST00000376709 ZNF552Q9H707 407 aaPredicted RBP17.45■□□□□ 0.38
VSX1-202ENST00000376709 METTL8Q9H825 291 aaKnown RBP17.45■□□□□ 0.38
VSX1-202ENST00000376709 NECAP2Q9NVZ3 263 aa17.45■□□□□ 0.38
VSX1-202ENST00000376709 SDHAF2Q9NX18 166 aa17.45■□□□□ 0.38
VSX1-202ENST00000376709 SPRR3Q9UBC9 169 aa17.45■□□□□ 0.38
VSX1-202ENST00000376709 SHPKQ9UHJ6 478 aa17.45■□□□□ 0.38
VSX1-202ENST00000376709 DOCK7Q96N67 2140 aa17.44■□□□□ 0.38
VSX1-202ENST00000376709 BCL2L11O43521 198 aa17.44■□□□□ 0.38
VSX1-202ENST00000376709 SCO1O75880 301 aa17.44■□□□□ 0.38
VSX1-202ENST00000376709 PDCD1Q15116 288 aa17.44■□□□□ 0.38
VSX1-202ENST00000376709 NSUN5P2Q63ZY6 315 aa17.44■□□□□ 0.38
VSX1-202ENST00000376709 RGS7BPQ6MZT1 257 aaPredicted RBP17.44■□□□□ 0.38
VSX1-202ENST00000376709 ST8SIA2Q92186 375 aa17.44■□□□□ 0.38
VSX1-202ENST00000376709 DMRTA2Q96SC8 542 aa17.44■□□□□ 0.38
VSX1-202ENST00000376709 REG4Q9BYZ8 158 aa17.44■□□□□ 0.38
VSX1-202ENST00000376709 WDR13Q9H1Z4 485 aa17.44■□□□□ 0.38
VSX1-202ENST00000376709 CSAG2Q9Y5P2 127 aa17.44■□□□□ 0.38
VSX1-202ENST00000376709 PDCD6O75340 191 aa17.43■□□□□ 0.38
VSX1-202ENST00000376709 FAM209AQ5JX71 171 aa17.43■□□□□ 0.38
VSX1-202ENST00000376709 POM121L2Q96KW2 1035 aa17.43■□□□□ 0.38
VSX1-202ENST00000376709 FAM221AA4D161 298 aa17.43■□□□□ 0.38
VSX1-202ENST00000376709 TEX46H3BTG2 121 aa17.43■□□□□ 0.38
VSX1-202ENST00000376709 OR7C1O76099 320 aaPredicted RBP17.43■□□□□ 0.38
VSX1-202ENST00000376709 NGFP01138 241 aa17.43■□□□□ 0.38
VSX1-202ENST00000376709 RPS2P15880 293 aaKnown RBP17.43■□□□□ 0.38
VSX1-202ENST00000376709 WT1P19544 449 aaPredicted RBP17.43■□□□□ 0.38
VSX1-202ENST00000376709 NPBWR2P48146 333 aa17.43■□□□□ 0.38
VSX1-202ENST00000376709 TNFSF10P50591 281 aa17.43■□□□□ 0.38
VSX1-202ENST00000376709 GPM6AP51674 278 aa17.43■□□□□ 0.38
VSX1-202ENST00000376709 HIKESHIQ53FT3 197 aa17.43■□□□□ 0.38
VSX1-202ENST00000376709 ZDHHC23Q8IYP9 409 aa17.43■□□□□ 0.38
VSX1-202ENST00000376709 OR5M9Q8NGP3 310 aa17.43■□□□□ 0.38
VSX1-202ENST00000376709 CCDC120Q96HB5 630 aa17.43■□□□□ 0.38
VSX1-202ENST00000376709 STARD10Q9Y365 291 aa17.43■□□□□ 0.38
VSX1-202ENST00000376709 ZFHX2Q9C0A1 2572 aaPredicted RBP17.43■□□□□ 0.38
VSX1-202ENST00000376709 PQLC2LA1A4F0 135 aa17.42■□□□□ 0.38
VSX1-202ENST00000376709 MFSD2BA6NFX1 497 aa17.42■□□□□ 0.38
VSX1-202ENST00000376709 APLNRP35414 380 aa17.42■□□□□ 0.38
VSX1-202ENST00000376709 HAAOP46952 286 aa17.42■□□□□ 0.38
VSX1-202ENST00000376709 SOX8P57073 446 aa17.42■□□□□ 0.38
VSX1-202ENST00000376709 PMP22Q01453 160 aa17.42■□□□□ 0.38
VSX1-202ENST00000376709 CLN3Q13286 438 aa17.42■□□□□ 0.38
VSX1-202ENST00000376709 DCUN1D4Q92564 292 aa17.42■□□□□ 0.38
VSX1-202ENST00000376709 ZNF471Q9BX82 626 aaPredicted RBP17.42■□□□□ 0.38
VSX1-202ENST00000376709 ZNF442Q9H7R0 627 aa17.42■□□□□ 0.38
VSX1-202ENST00000376709 ZDHHC11Q9H8X9 412 aa17.42■□□□□ 0.38
VSX1-202ENST00000376709 IFNA2P01563 188 aa17.42■□□□□ 0.38
VSX1-202ENST00000376709 LUMP51884 338 aaPredicted RBP17.42■□□□□ 0.38
VSX1-202ENST00000376709 PLEKHN1Q494U1 663 aaPredicted RBP17.42■□□□□ 0.38
VSX1-202ENST00000376709 FBXW9Q5XUX1 488 aa17.42■□□□□ 0.38
VSX1-202ENST00000376709 MPTX1A8MV57 137 aa17.41■□□□□ 0.38
VSX1-202ENST00000376709 KCNAB3O43448 404 aa17.41■□□□□ 0.38
VSX1-202ENST00000376709 IL18BPO95998 194 aa17.41■□□□□ 0.38
VSX1-202ENST00000376709 FUT3P21217 361 aa17.41■□□□□ 0.38
VSX1-202ENST00000376709 CCL11P51671 97 aa17.41■□□□□ 0.38
VSX1-202ENST00000376709 CEACAM21Q3KPI0 293 aa17.41■□□□□ 0.38
VSX1-202ENST00000376709 SLC22A25Q6T423 547 aa17.41■□□□□ 0.38
VSX1-202ENST00000376709 SGPP2Q8IWX5 399 aa17.41■□□□□ 0.38
VSX1-202ENST00000376709 PDZD9Q8IXQ8 264 aa17.41■□□□□ 0.38
VSX1-202ENST00000376709 RELL2Q8NC24 303 aaPredicted RBP17.41■□□□□ 0.38
VSX1-202ENST00000376709 BHLHE23Q8NDY6 225 aa17.41■□□□□ 0.38
VSX1-202ENST00000376709 OR1K1Q8NGR3 316 aa17.41■□□□□ 0.38
VSX1-202ENST00000376709 OR1S1Q8NH92 325 aa17.41■□□□□ 0.38
VSX1-202ENST00000376709 SLAMF9Q96A28 289 aa17.41■□□□□ 0.38
VSX1-202ENST00000376709 C12orf4Q9NQ89 552 aa17.41■□□□□ 0.38
VSX1-202ENST00000376709 CRIM1Q9NZV1 1036 aa17.41■□□□□ 0.38
VSX1-202ENST00000376709 ZNF629Q9UEG4 869 aaPredicted RBP17.41■□□□□ 0.38
VSX1-202ENST00000376709 PFDN2Q9UHV9 154 aa17.41■□□□□ 0.38
VSX1-202ENST00000376709 TEX13DA0A0J9YY54 714 aaPredicted RBP17.4■□□□□ 0.38
VSX1-202ENST00000376709 CTSDP07339 412 aaPredicted RBP17.4■□□□□ 0.38
VSX1-202ENST00000376709 PTGER4P35408 488 aa17.4■□□□□ 0.38
VSX1-202ENST00000376709 RBMXP38159 391 aaKnown RBP17.4■□□□□ 0.38
VSX1-202ENST00000376709 HPSE2Q8WWQ2 592 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms