RNA–Protein interactions for RNA: ENST00000376496.4

CLCN6-206, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5 BASIC

Gene CLCN6, Length 2,922 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-206ENST00000376496 CHIAQ9BZP6 476 aa10.75□□□□□ -0.69
CLCN6-206ENST00000376496 FN3KRPQ9HA64 309 aa10.75□□□□□ -0.69
CLCN6-206ENST00000376496 VSIG4Q9Y279 399 aa10.75□□□□□ -0.69
CLCN6-206ENST00000376496 PLEKHA6Q9Y2H5 1048 aa10.75□□□□□ -0.69
CLCN6-206ENST00000376496 PI3P19957 117 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 CCKARP32238 428 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 UCNP55089 124 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 LY6DQ14210 128 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 C2orf68Q2NKX9 166 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 ATPAF1Q5TC12 328 aaPredicted RBP10.74□□□□□ -0.69
CLCN6-206ENST00000376496 GLDNQ6ZMI3 551 aaPredicted RBP10.74□□□□□ -0.69
CLCN6-206ENST00000376496 Q6ZPA2 131 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 SLC36A1Q7Z2H8 476 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 RELL2Q8NC24 303 aaPredicted RBP10.74□□□□□ -0.69
CLCN6-206ENST00000376496 OPA3Q9H6K4 179 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 OBP2BQ9NPH6 170 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 CA10Q9NS85 328 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 KALRNO60229 2985 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 POLEQ07864 2286 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 ZNF780AO75290 641 aaPredicted RBP10.74□□□□□ -0.69
CLCN6-206ENST00000376496 TRAPPC2P0DI81 140 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 TRAPPC2BP0DI82 140 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 HOXB1P14653 301 aaPredicted RBP10.74□□□□□ -0.69
CLCN6-206ENST00000376496 PRKACAP17612 351 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 GNG3P63215 75 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 NAAAQ02083 359 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 BAMBIQ13145 260 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 PNLIPRP3Q17RR3 467 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 ZNF826PQ6ZT77 177 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 OCSTAMPQ9BR26 566 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 PLSCR3Q9NRY6 295 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 DUSP13Q9UII6 198 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 MPC1Q9Y5U8 109 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 CACNA1AO00555 2505 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 TRGV8A0A0C4DH27 118 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 A0A1B0GUH1 482 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 TMEM82A0PJX8 343 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 DISC1C4P0D8 188 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 F5H5P2 479 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 TRAPPC2LH3BP13 241 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 CDIPTO14735 213 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 MLNRO43193 412 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 SIX6O95475 246 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 IFNA6P05013 189 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 RAC2P15153 192 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 NPY4RP50391 375 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 PPA1Q15181 289 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 C4orf46Q504U0 113 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 Q6ZR03 302 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 PIAS4Q8N2W9 510 aaPredicted RBP10.74□□□□□ -0.69
CLCN6-206ENST00000376496 MARCH1Q8TCQ1 289 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 ZCCHC14Q8WYQ9 949 aaKnown RBP10.74□□□□□ -0.69
CLCN6-206ENST00000376496 CMSS1Q9BQ75 279 aaKnown RBP10.74□□□□□ -0.69
CLCN6-206ENST00000376496 OR51I2Q9H344 312 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 ZNF442Q9H7R0 627 aa10.74□□□□□ -0.69
CLCN6-206ENST00000376496 AKR7A2O43488 359 aa10.73□□□□□ -0.69
CLCN6-206ENST00000376496 TIMM8AO60220 97 aaPredicted RBP10.73□□□□□ -0.69
CLCN6-206ENST00000376496 TFF1P04155 84 aa10.73□□□□□ -0.69
CLCN6-206ENST00000376496 RAG2P55895 527 aa10.73□□□□□ -0.69
CLCN6-206ENST00000376496 FAM189A2Q15884 450 aa10.73□□□□□ -0.69
CLCN6-206ENST00000376496 MUC20Q8N307 709 aaPredicted RBP10.73□□□□□ -0.69
CLCN6-206ENST00000376496 ADAD2Q8NCV1 583 aaKnown RBP10.73□□□□□ -0.69
CLCN6-206ENST00000376496 TMPRSS13Q9BYE2 586 aa10.73□□□□□ -0.69
CLCN6-206ENST00000376496 IL36GQ9NZH8 169 aa10.73□□□□□ -0.69
CLCN6-206ENST00000376496 SCP2D1Q9UJQ7 156 aa10.73□□□□□ -0.69
CLCN6-206ENST00000376496 PURGQ9UJV8 347 aaKnown RBP10.73□□□□□ -0.69
CLCN6-206ENST00000376496 SERPINE3A8MV23 424 aa10.73□□□□□ -0.69
CLCN6-206ENST00000376496 ATP6V1G2-DDX39BF2Z307 99 aa10.73□□□□□ -0.69
CLCN6-206ENST00000376496 FABP7O15540 132 aa10.73□□□□□ -0.69
CLCN6-206ENST00000376496 TSPAN5P62079 268 aa10.73□□□□□ -0.69
CLCN6-206ENST00000376496 IKZF1Q13422 519 aa10.73□□□□□ -0.69
CLCN6-206ENST00000376496 OR8G1Q15617 311 aa10.73□□□□□ -0.69
CLCN6-206ENST00000376496 TIMM23BQ5SRD1 257 aa10.73□□□□□ -0.69
CLCN6-206ENST00000376496 HOGA1Q86XE5 327 aa10.73□□□□□ -0.69
CLCN6-206ENST00000376496 SCCPDHQ8NBX0 429 aa10.73□□□□□ -0.69
CLCN6-206ENST00000376496 OR5H2Q8NGV7 314 aa10.73□□□□□ -0.69
CLCN6-206ENST00000376496 UFSP2Q9NUQ7 469 aa10.73□□□□□ -0.69
CLCN6-206ENST00000376496 EHFQ9NZC4 300 aa10.73□□□□□ -0.69
CLCN6-206ENST00000376496 ZNF835Q9Y2P0 537 aa10.73□□□□□ -0.69
CLCN6-206ENST00000376496 AMDHD2Q9Y303 409 aa10.73□□□□□ -0.69
CLCN6-206ENST00000376496 HS3ST1O14792 307 aa10.72□□□□□ -0.69
CLCN6-206ENST00000376496 ZNF154Q13106 437 aa10.72□□□□□ -0.69
CLCN6-206ENST00000376496 MEF2DQ14814 521 aa10.72□□□□□ -0.69
CLCN6-206ENST00000376496 METTL11BQ5VVY1 283 aa10.72□□□□□ -0.69
CLCN6-206ENST00000376496 PRAMEF6Q5VXH4 476 aa10.72□□□□□ -0.69
CLCN6-206ENST00000376496 UNQ6494/PRO21346Q6UXR6 183 aa10.72□□□□□ -0.69
CLCN6-206ENST00000376496 MKXQ8IYA7 352 aa10.72□□□□□ -0.69
CLCN6-206ENST00000376496 ZSCAN4Q8NAM6 433 aaPredicted RBP10.72□□□□□ -0.69
CLCN6-206ENST00000376496 MUCL1Q96DR8 90 aa10.72□□□□□ -0.69
CLCN6-206ENST00000376496 BOD1Q96IK1 185 aa10.72□□□□□ -0.69
CLCN6-206ENST00000376496 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.72□□□□□ -0.69
CLCN6-206ENST00000376496 IQCF6A8MYZ5 107 aa10.72□□□□□ -0.69
CLCN6-206ENST00000376496 PDCD6O75340 191 aa10.72□□□□□ -0.69
CLCN6-206ENST00000376496 SULT1A3P0DMM9 295 aa10.72□□□□□ -0.69
CLCN6-206ENST00000376496 SULT1A4P0DMN0 295 aa10.72□□□□□ -0.69
CLCN6-206ENST00000376496 OR3A3P47888 321 aa10.72□□□□□ -0.69
CLCN6-206ENST00000376496 MPPED2Q15777 294 aa10.72□□□□□ -0.69
CLCN6-206ENST00000376496 Q5BKY6 102 aa10.72□□□□□ -0.69
CLCN6-206ENST00000376496 CD276Q5ZPR3 534 aa10.72□□□□□ -0.69
CLCN6-206ENST00000376496 LIN54Q6MZP7 749 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms