RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 ST8SIA5O15466 376 aa12.19□□□□□ -0.46
COL4A1-201ENST00000375820 DYNLT3P51808 116 aa12.19□□□□□ -0.46
COL4A1-201ENST00000375820 TFF2Q03403 129 aa12.19□□□□□ -0.46
COL4A1-201ENST00000375820 TRAV39A0A0B4J263 110 aa12.19□□□□□ -0.46
COL4A1-201ENST00000375820 K7EQS6 105 aa12.19□□□□□ -0.46
COL4A1-201ENST00000375820 RHBDL1O75783 438 aa12.19□□□□□ -0.46
COL4A1-201ENST00000375820 IGLV3-25P01717 112 aa12.19□□□□□ -0.46
COL4A1-201ENST00000375820 ANKRD34CP0C6C1 535 aa12.19□□□□□ -0.46
COL4A1-201ENST00000375820 MRPL58Q14197 206 aaKnown RBP12.19□□□□□ -0.46
COL4A1-201ENST00000375820 OR2W3Q7Z3T1 314 aa12.19□□□□□ -0.46
COL4A1-201ENST00000375820 DDX60Q8IY21 1712 aaKnown RBP12.19□□□□□ -0.46
COL4A1-201ENST00000375820 ASPDHA6ND91 283 aa12.19□□□□□ -0.46
COL4A1-201ENST00000375820 RPL29P47914 159 aaKnown RBP12.19□□□□□ -0.46
COL4A1-201ENST00000375820 HYAL1Q12794 435 aa12.19□□□□□ -0.46
COL4A1-201ENST00000375820 ETV3LQ6ZN32 361 aa12.19□□□□□ -0.46
COL4A1-201ENST00000375820 LINC01465Q8N7H1 131 aa12.19□□□□□ -0.46
COL4A1-201ENST00000375820 CNTRLQ7Z7A1 2325 aa12.19□□□□□ -0.46
COL4A1-201ENST00000375820 A0A0B4J2E0 115 aa12.19□□□□□ -0.46
COL4A1-201ENST00000375820 A0A1B0GX12 115 aa12.19□□□□□ -0.46
COL4A1-201ENST00000375820 C9orf170A2RU37 121 aa12.19□□□□□ -0.46
COL4A1-201ENST00000375820 MT-CO3P00414 261 aa12.19□□□□□ -0.46
COL4A1-201ENST00000375820 MPLP40238 635 aa12.19□□□□□ -0.46
COL4A1-201ENST00000375820 MUC15Q8N387 334 aa12.19□□□□□ -0.46
COL4A1-201ENST00000375820 C5orf52A6NGY3 159 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 HRASP01112 189 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 ACAA2P42765 397 aaKnown RBP12.18□□□□□ -0.46
COL4A1-201ENST00000375820 CDKN2AP42771 156 aaKnown RBP12.18□□□□□ -0.46
COL4A1-201ENST00000375820 ZNF141Q15928 474 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 FAM162BQ5T6X4 162 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 OR10G4Q8NGN3 311 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 OR10G9Q8NGN4 311 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 OR10G7Q8NGN6 311 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 TMEM174Q8WUU8 243 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 RASL12Q9NYN1 266 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 KLF3P57682 345 aaPredicted RBP12.18□□□□□ -0.46
COL4A1-201ENST00000375820 ACER2Q5QJU3 275 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 ARL6IP6Q8N6S5 226 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 LINC00052Q96N35 136 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 C19orf43Q9BQ61 176 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 IL21Q9HBE4 155 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 SIGLEC7Q9Y286 467 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 WSB1Q9Y6I7 421 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 PRSS1P07477 247 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 SULT1A2P50226 295 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 MVDP53602 400 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 CEBPEQ15744 281 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 DYRK2Q92630 601 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 OCIAD1Q9NX40 245 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 DHRS3O75911 302 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 ZFPL1O95159 310 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 TMEM241Q24JQ0 296 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 PP6455Q8WZ26 134 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 DNAJB12Q9NXW2 375 aaKnown RBP12.18□□□□□ -0.46
COL4A1-201ENST00000375820 PCDHGA9Q9Y5G4 932 aaKnown RBP12.18□□□□□ -0.46
COL4A1-201ENST00000375820 CIDEAO60543 219 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 FGF2P09038 288 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 CT62P0C5K7 136 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 BCL3P20749 454 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 GPR3P46089 330 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 DHRS2Q13268 280 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 TP53I13Q8NBR0 393 aaPredicted RBP12.18□□□□□ -0.46
COL4A1-201ENST00000375820 CLRN3Q8NCR9 226 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 SSMEM1Q8WWF3 244 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 TMEM204Q9BSN7 226 aa12.18□□□□□ -0.46
COL4A1-201ENST00000375820 AURKAIP1Q9NWT8 199 aaPredicted RBP12.18□□□□□ -0.46
COL4A1-201ENST00000375820 OR4A8P0C604 315 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 PNLIPP16233 465 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 POLR2GP62487 172 aaKnown RBP eCLIP12.17□□□□□ -0.46
COL4A1-201ENST00000375820 ZNF154Q13106 437 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 DGAT2L7PQ6IED9 249 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 C17orf47Q8NEP4 570 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 C4orf45Q96LM5 186 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.17□□□□□ -0.46
COL4A1-201ENST00000375820 LIPGQ9Y5X9 500 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 TMSB15BA0A087X1C1 80 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 TRBV5-4A0A0C4DH59 114 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 M0R2Z0 102 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 KCNJ3P48549 501 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 FUT7Q11130 342 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 TMEM92Q6UXU6 159 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 UBALD2Q8IYN6 164 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 TRAV17A0A0B4J275 112 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 ADAP1O75689 374 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 SFT2D2O95562 160 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 LY86O95711 162 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 FAM87AP0C7U9 286 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 TMIGD3P0DMS9 266 aaPredicted RBP12.17□□□□□ -0.46
COL4A1-201ENST00000375820 DAOP14920 347 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 PRICKLE4Q2TBC4 344 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 FDX2Q6P4F2 183 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 CBLN3Q6UW01 205 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 LINC01555Q8NAE3 123 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 MOGAT1Q96PD6 335 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 MS4A10Q96PG2 267 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 SEBOXQ9HB31 216 aaPredicted RBP12.17□□□□□ -0.46
COL4A1-201ENST00000375820 ZNF207O43670 478 aaKnown RBP12.17□□□□□ -0.46
COL4A1-201ENST00000375820 CTAG2O75638 210 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 ARG1P05089 322 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 COL9A1P20849 921 aa12.17□□□□□ -0.46
COL4A1-201ENST00000375820 CTF1Q16619 201 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms