RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 GGACTQ9BVM4 153 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 PAPOLGQ9BWT3 736 aaKnown RBP9.69□□□□□ -0.86
CCDC40-203ENST00000374877 FGF21Q9NSA1 209 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 BDP1A6H8Y1 2624 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 LAMA1P25391 3075 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 QDPRP09417 244 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 PGA4P0DJD7 388 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 PGA3P0DJD8 388 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 PRF1P14222 555 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 CHATP28329 748 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 P2RY1P47900 373 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 NHLH2Q02577 135 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 RSPO4Q2I0M5 234 aaPredicted RBP9.69□□□□□ -0.86
CCDC40-203ENST00000374877 KDF1Q8NAX2 398 aaPredicted RBP9.69□□□□□ -0.86
CCDC40-203ENST00000374877 SUMF2Q8NBJ7 301 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 PFDN5Q99471 154 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 KLHL13Q9P2N7 655 aa9.69□□□□□ -0.86
CCDC40-203ENST00000374877 NXT1Q9UKK6 140 aaKnown RBP9.69□□□□□ -0.86
CCDC40-203ENST00000374877 RCL1Q9Y2P8 373 aaKnown RBP9.69□□□□□ -0.86
CCDC40-203ENST00000374877 NCOR1O75376 2440 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 PI4KAP42356 2102 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 RALGAPA1Q6GYQ0 2036 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 GPR37O15354 613 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 EFNA2O43921 213 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 FBP1P09467 338 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 ZNF41P51814 821 aaPredicted RBP9.68□□□□□ -0.86
CCDC40-203ENST00000374877 UBE2V2Q15819 145 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 ZNF239Q16600 458 aaKnown RBP9.68□□□□□ -0.86
CCDC40-203ENST00000374877 SLAMF9Q96A28 289 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 RARRES2Q99969 163 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 WDR77Q9BQA1 342 aaPredicted RBP9.68□□□□□ -0.86
CCDC40-203ENST00000374877 SDHAF3Q9NRP4 125 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 B3GALT1Q9Y5Z6 326 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 WRBO00258 174 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 GPR137BO60478 399 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 ECI1P42126 302 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 ZNF84P51523 738 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 RPS23P62266 143 aaKnown RBP9.68□□□□□ -0.86
CCDC40-203ENST00000374877 OR2B11Q5JQS5 317 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 CDCP2Q5VXM1 449 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 NSUN5P2Q63ZY6 315 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 FBXW12Q6X9E4 464 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 SLC38A9Q8NBW4 561 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 OR5L1Q8NGL2 311 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 RTN4IP1Q8WWV3 396 aaPredicted RBP9.68□□□□□ -0.86
CCDC40-203ENST00000374877 ZNF160Q9HCG1 818 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 PNRC2Q9NPJ4 139 aaKnown RBP9.68□□□□□ -0.86
CCDC40-203ENST00000374877 ANXA10Q9UJ72 324 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 ADAMTS9Q9P2N4 1935 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 PPIHO43447 177 aaKnown RBP9.68□□□□□ -0.86
CCDC40-203ENST00000374877 SFTPDP35247 375 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 NDUFA6P56556 154 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 CLINT1Q14677 625 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 NAXEQ8NCW5 288 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 LYZL4Q96KX0 146 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 GINS3Q9BRX5 216 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 ARV1Q9H2C2 271 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 LIME1Q9H400 295 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 PPP4R1LQ9P1A2 415 aa9.68□□□□□ -0.86
CCDC40-203ENST00000374877 NCOA6Q14686 2063 aaPredicted RBP9.67□□□□□ -0.86
CCDC40-203ENST00000374877 A0A1B0GX78 115 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 ZNF726A6NNF4 738 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 FOXI3A8MTJ6 420 aaPredicted RBP9.67□□□□□ -0.86
CCDC40-203ENST00000374877 ZNF728P0DKX0 622 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 CCL1P22362 96 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 RAB1AP62820 205 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 ZFP36L1Q07352 338 aaKnown RBP9.67□□□□□ -0.86
CCDC40-203ENST00000374877 TAF9Q16594 264 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 HIST2H3AQ71DI3 136 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 OR52M1Q8NGK5 317 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 SSC4DQ8WTU2 575 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 JSRP1Q96MG2 331 aaPredicted RBP9.67□□□□□ -0.86
CCDC40-203ENST00000374877 FAAP24Q9BTP7 215 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 STRAPQ9Y3F4 350 aaKnown RBP9.67□□□□□ -0.86
CCDC40-203ENST00000374877 A0A1W2PNV4 684 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 ZNF727A8MUV8 499 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 ZNF814B7Z6K7 855 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 CDX4O14627 284 aaPredicted RBP9.67□□□□□ -0.86
CCDC40-203ENST00000374877 TRAF3IP2O43734 574 aaPredicted RBP9.67□□□□□ -0.86
CCDC40-203ENST00000374877 ANGPTL7O43827 346 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 RAMP1O60894 148 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 CD59P13987 128 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 ZNF43P17038 809 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 HAAOP46952 286 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 ARL6IP1Q15041 203 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 CRIP3Q6Q6R5 217 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 MALSU1Q96EH3 234 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 NAA60Q9H7X0 242 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 RARRES3Q9UL19 164 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 PIGLQ9Y2B2 252 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 RFNGQ9Y644 331 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 URGCP-MRPS24S4R325 110 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 ADAMTS20P59510 1910 aa9.67□□□□□ -0.86
CCDC40-203ENST00000374877 NSG1A0A0A6YYJ2 146 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 ONECUT2O95948 504 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 KLK2P20151 261 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 S100A2P29034 98 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 GUCA1AP43080 201 aaPredicted RBP9.66□□□□□ -0.86
CCDC40-203ENST00000374877 UCP2P55851 309 aa9.66□□□□□ -0.86
CCDC40-203ENST00000374877 GRB2P62993 217 aaKnown RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms