RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 DUX4L6P0CJ89 424 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 DUX4L7P0CJ90 424 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 ABCA11PQ4W5N1 156 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 SCGB3A2Q96PL1 93 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 OR2H1Q9GZK4 316 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 GPR35Q9HC97 309 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 IL36RNQ9UBH0 155 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 DUX4Q9UBX2 424 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 NOSIPQ9Y314 301 aaKnown RBP14.79□□□□□ -0.04
RXRB-201ENST00000374680 ESPL1Q14674 2120 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 KIAA2026Q5HYC2 2103 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 NXPH3O95157 252 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 FARS2O95363 451 aaKnown RBP14.79□□□□□ -0.04
RXRB-201ENST00000374680 CD79AP11912 226 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 ITGA3P26006 1051 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 FAM3AP98173 230 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 LYZL2Q7Z4W2 148 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 TUSC5Q8IXB3 177 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 FNDC9Q8TBE3 224 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 BSCL2Q96G97 398 aaPredicted RBP14.79□□□□□ -0.04
RXRB-201ENST00000374680 PRRG4Q9BZD6 226 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 SLC7A10Q9NS82 523 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 TIMM10BQ9Y5J6 103 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 MRPL33O75394 65 aaKnown RBP14.79□□□□□ -0.04
RXRB-201ENST00000374680 OR5AC1P0C628 307 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 HIST1H3AP68431 136 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 HIST2H3PS2Q5TEC6 136 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 GGNBP1Q5YKI7 109 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 HIST2H3AQ71DI3 136 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 FOXJ2Q9P0K8 574 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 PRELID1Q9Y255 219 aa14.79□□□□□ -0.04
RXRB-201ENST00000374680 F8VVB4 439 aa14.78□□□□□ -0.04
RXRB-201ENST00000374680 F8VWA3 439 aa14.78□□□□□ -0.04
RXRB-201ENST00000374680 F8W036 122 aa14.78□□□□□ -0.04
RXRB-201ENST00000374680 BLOC1S1P78537 153 aa14.78□□□□□ -0.04
RXRB-201ENST00000374680 ARF1P84077 181 aaKnown RBP14.78□□□□□ -0.04
RXRB-201ENST00000374680 PRSS54Q6PEW0 395 aa14.78□□□□□ -0.04
RXRB-201ENST00000374680 C5orf49A4QMS7 147 aa14.78□□□□□ -0.04
RXRB-201ENST00000374680 APOC1P02654 83 aa14.78□□□□□ -0.04
RXRB-201ENST00000374680 EDN3P14138 238 aa14.78□□□□□ -0.04
RXRB-201ENST00000374680 TFAP2EQ6VUC0 442 aa14.78□□□□□ -0.04
RXRB-201ENST00000374680 PSMF1Q92530 271 aa14.78□□□□□ -0.04
RXRB-201ENST00000374680 NUDT16L1Q9BRJ7 211 aaKnown RBP14.78□□□□□ -0.04
RXRB-201ENST00000374680 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.78□□□□□ -0.04
RXRB-201ENST00000374680 GHRLQ9UBU3 117 aa14.78□□□□□ -0.04
RXRB-201ENST00000374680 MAGEA5P43359 124 aa14.77□□□□□ -0.04
RXRB-201ENST00000374680 SPEM2Q0P670 501 aa14.77□□□□□ -0.04
RXRB-201ENST00000374680 FAM189A2Q15884 450 aa14.77□□□□□ -0.04
RXRB-201ENST00000374680 IGSF11Q5DX21 431 aa14.77□□□□□ -0.04
RXRB-201ENST00000374680 OSR2Q8N2R0 312 aa14.77□□□□□ -0.04
RXRB-201ENST00000374680 SUMF1Q8NBK3 374 aa14.77□□□□□ -0.04
RXRB-201ENST00000374680 POC1AQ8NBT0 407 aa14.77□□□□□ -0.04
RXRB-201ENST00000374680 NEK7Q8TDX7 302 aa14.77□□□□□ -0.04
RXRB-201ENST00000374680 TM2D1Q9BX74 207 aa14.77□□□□□ -0.04
RXRB-201ENST00000374680 ANAPC10Q9UM13 185 aa14.77□□□□□ -0.04
RXRB-201ENST00000374680 TOR1AO14656 332 aa14.77□□□□□ -0.05
RXRB-201ENST00000374680 BET1O15155 118 aa14.77□□□□□ -0.05
RXRB-201ENST00000374680 FCGR3AP08637 254 aa14.77□□□□□ -0.05
RXRB-201ENST00000374680 ZNF728P0DKX0 622 aa14.77□□□□□ -0.05
RXRB-201ENST00000374680 ZNF708P17019 499 aa14.77□□□□□ -0.05
RXRB-201ENST00000374680 CBLN2Q8IUK8 224 aa14.77□□□□□ -0.05
RXRB-201ENST00000374680 RTN4IP1Q8WWV3 396 aaPredicted RBP14.77□□□□□ -0.05
RXRB-201ENST00000374680 SLAMF9Q96A28 289 aa14.77□□□□□ -0.05
RXRB-201ENST00000374680 C12orf49Q9H741 205 aa14.77□□□□□ -0.05
RXRB-201ENST00000374680 PARPBPQ9NWS1 579 aa14.77□□□□□ -0.05
RXRB-201ENST00000374680 SLC7A11Q9UPY5 501 aa14.77□□□□□ -0.05
RXRB-201ENST00000374680 TRIM77I1YAP6 450 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 NGFP01138 241 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 TDGF1P13385 188 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 TRA2AQ13595 282 aaKnown RBP eCLIP14.76□□□□□ -0.05
RXRB-201ENST00000374680 PDSS1Q5T2R2 415 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 ZNF611Q8N823 705 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 OR56B2PQ8NGI1 322 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 CPT1CQ8TCG5 803 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 ZNF488Q96MN9 340 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 LDAHQ9H6V9 325 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 MED6O75586 246 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 CST2P09228 141 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 ADCYAP1P18509 176 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 GPM6AP51674 278 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 CNN3Q15417 329 aaKnown RBP14.76□□□□□ -0.05
RXRB-201ENST00000374680 ATP1A1-AS1Q5TC04 95 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 FOXL2NBQ6ZUU3 175 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 INTS12Q96CB8 462 aaKnown RBP14.76□□□□□ -0.05
RXRB-201ENST00000374680 NKX6-2Q9C056 277 aaPredicted RBP14.76□□□□□ -0.05
RXRB-201ENST00000374680 TLNRD1Q9H1K6 362 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 C1orf123Q9NWV4 160 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 ICE1Q9Y2F5 2266 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 PCNX2A6NKB5 2137 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 ZNF503-AS2A6NEH8 195 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 DNASE2O00115 360 aaPredicted RBP14.76□□□□□ -0.05
RXRB-201ENST00000374680 RPL12P30050 165 aaKnown RBP14.76□□□□□ -0.05
RXRB-201ENST00000374680 PDZK1IP1Q13113 114 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 SPIN3Q5JUX0 258 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 PUSL1Q8N0Z8 303 aaKnown RBP14.76□□□□□ -0.05
RXRB-201ENST00000374680 RNF141Q8WVD5 230 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 TAF9BQ9HBM6 251 aa14.76□□□□□ -0.05
RXRB-201ENST00000374680 TMEM218A2RU14 115 aa14.75□□□□□ -0.05
RXRB-201ENST00000374680 K7EPK0 472 aa14.75□□□□□ -0.05
RXRB-201ENST00000374680 HAAOP46952 286 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms