RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 BMXP51813 675 aa12.72□□□□□ -0.37
PFDN6-202ENST00000374607 IL13RA1P78552 427 aa12.72□□□□□ -0.37
PFDN6-202ENST00000374607 STUMQ69YW2 141 aa12.72□□□□□ -0.37
PFDN6-202ENST00000374607 AWAT2Q6E213 333 aa12.72□□□□□ -0.37
PFDN6-202ENST00000374607 ASPHD2Q6ICH7 369 aa12.72□□□□□ -0.37
PFDN6-202ENST00000374607 TMEM91Q6ZNR0 172 aa12.72□□□□□ -0.37
PFDN6-202ENST00000374607 Q71RC1 249 aaPredicted RBP12.72□□□□□ -0.37
PFDN6-202ENST00000374607 ST8SIA4Q92187 359 aa12.72□□□□□ -0.37
PFDN6-202ENST00000374607 MUL1Q969V5 352 aa12.72□□□□□ -0.37
PFDN6-202ENST00000374607 NKX3-1Q99801 234 aaPredicted RBP12.72□□□□□ -0.37
PFDN6-202ENST00000374607 DNTTIP1Q9H147 329 aa12.72□□□□□ -0.37
PFDN6-202ENST00000374607 RHOFQ9HBH0 211 aa12.72□□□□□ -0.37
PFDN6-202ENST00000374607 RBFOX1Q9NWB1 397 aaKnown RBP12.72□□□□□ -0.37
PFDN6-202ENST00000374607 LOC100506127A0A0U1RQW1 187 aa12.71□□□□□ -0.37
PFDN6-202ENST00000374607 TRDV1A0A1B0GX56 115 aa12.71□□□□□ -0.37
PFDN6-202ENST00000374607 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.71□□□□□ -0.37
PFDN6-202ENST00000374607 PDCD5O14737 125 aa12.71□□□□□ -0.37
PFDN6-202ENST00000374607 PHF1O43189 567 aaPredicted RBP12.71□□□□□ -0.37
PFDN6-202ENST00000374607 SC5DO75845 299 aa12.71□□□□□ -0.37
PFDN6-202ENST00000374607 HTR3BO95264 441 aa12.71□□□□□ -0.37
PFDN6-202ENST00000374607 KNG1P01042 644 aa12.71□□□□□ -0.37
PFDN6-202ENST00000374607 NDUFB7P17568 137 aa12.71□□□□□ -0.37
PFDN6-202ENST00000374607 GALP22466 123 aa12.71□□□□□ -0.37
PFDN6-202ENST00000374607 PRDX2P32119 198 aa12.71□□□□□ -0.37
PFDN6-202ENST00000374607 NPBWR2P48146 333 aa12.71□□□□□ -0.37
PFDN6-202ENST00000374607 ZP1P60852 638 aa12.71□□□□□ -0.37
PFDN6-202ENST00000374607 GPR176Q14439 515 aa12.71□□□□□ -0.37
PFDN6-202ENST00000374607 TIMM50Q3ZCQ8 353 aa12.71□□□□□ -0.37
PFDN6-202ENST00000374607 CD276Q5ZPR3 534 aa12.71□□□□□ -0.37
PFDN6-202ENST00000374607 C22orf42Q6IC83 251 aa12.71□□□□□ -0.37
PFDN6-202ENST00000374607 RNF144BQ7Z419 303 aa12.71□□□□□ -0.37
PFDN6-202ENST00000374607 CDH26Q8IXH8 852 aa12.71□□□□□ -0.37
PFDN6-202ENST00000374607 TMEM185AQ8NFB2 350 aa12.71□□□□□ -0.37
PFDN6-202ENST00000374607 PXT1Q8NFP0 134 aa12.71□□□□□ -0.37
PFDN6-202ENST00000374607 MRPS26Q9BYN8 205 aaKnown RBP12.71□□□□□ -0.37
PFDN6-202ENST00000374607 GSX1Q9H4S2 264 aaPredicted RBP12.71□□□□□ -0.37
PFDN6-202ENST00000374607 PLGRKTQ9HBL7 147 aa12.71□□□□□ -0.37
PFDN6-202ENST00000374607 MRPS28Q9Y2Q9 187 aaKnown RBP12.71□□□□□ -0.37
PFDN6-202ENST00000374607 TRAV20A0A0B4J274 112 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 F5H0A9 414 aaPredicted RBP12.7□□□□□ -0.38
PFDN6-202ENST00000374607 DVL1O14640 695 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 SH2D1BO14796 132 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 ZNF780AO75290 641 aaPredicted RBP12.7□□□□□ -0.38
PFDN6-202ENST00000374607 KDM4BO94953 1096 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 CDRT1O95170 752 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 SERPINA2P20848 420 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 RANBP1P43487 201 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 MTNR1BP49286 362 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 PSMD7P51665 324 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 GP2P55259 537 aaKnown RBP12.7□□□□□ -0.38
PFDN6-202ENST00000374607 ERVK11-1P61568 191 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 SEC61A1P61619 476 aaKnown RBP12.7□□□□□ -0.38
PFDN6-202ENST00000374607 SCN1BQ07699 218 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 FAHD2BQ6P2I3 314 aaPredicted RBP12.7□□□□□ -0.38
PFDN6-202ENST00000374607 GLIPR1L1Q6UWM5 242 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 BTNL3Q6UXE8 466 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 ZNF561Q8N587 486 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 FAM216BQ8N7L0 139 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 ASCC1Q8N9N2 400 aaKnown RBP12.7□□□□□ -0.38
PFDN6-202ENST00000374607 ANGPTL6Q8NI99 470 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 H1FXQ92522 213 aaKnown RBP12.7□□□□□ -0.38
PFDN6-202ENST00000374607 TMEM186Q96B77 213 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 FAHD2AQ96GK7 314 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 CHCHD6Q9BRQ6 235 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 UQCC2Q9BRT2 126 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 CNTD2Q9H8S5 307 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 HES4Q9HCC6 221 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 HMG20AQ9NP66 347 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 HIF1ANQ9NWT6 349 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 KAAG1Q9UBP8 84 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 SLC25A10Q9UBX3 287 aaPredicted RBP12.7□□□□□ -0.38
PFDN6-202ENST00000374607 CR1P17927 2039 aa12.7□□□□□ -0.38
PFDN6-202ENST00000374607 IGKV1D-17A0A075B6S4 117 aa12.69□□□□□ -0.38
PFDN6-202ENST00000374607 LOC105371242A0A075B767 164 aa12.69□□□□□ -0.38
PFDN6-202ENST00000374607 IGKV1-12A0A0C4DH73 117 aa12.69□□□□□ -0.38
PFDN6-202ENST00000374607 A0A0G2JMP0 313 aa12.69□□□□□ -0.38
PFDN6-202ENST00000374607 A0A0X1KG70 313 aa12.69□□□□□ -0.38
PFDN6-202ENST00000374607 A8MV72 311 aaPredicted RBP12.69□□□□□ -0.38
PFDN6-202ENST00000374607 F8VVB4 439 aa12.69□□□□□ -0.38
PFDN6-202ENST00000374607 F8VWA3 439 aa12.69□□□□□ -0.38
PFDN6-202ENST00000374607 HAND1O96004 215 aa12.69□□□□□ -0.38
PFDN6-202ENST00000374607 IGKV1D-12P01611 117 aa12.69□□□□□ -0.38
PFDN6-202ENST00000374607 TFF1P04155 84 aa12.69□□□□□ -0.38
PFDN6-202ENST00000374607 CHRM2P08172 466 aa12.69□□□□□ -0.38
PFDN6-202ENST00000374607 DUSP1P28562 367 aa12.69□□□□□ -0.38
PFDN6-202ENST00000374607 CEBPDP49716 269 aaPredicted RBP12.69□□□□□ -0.38
PFDN6-202ENST00000374607 DVL1P1P54792 670 aaPredicted RBP12.69□□□□□ -0.38
PFDN6-202ENST00000374607 SLC22A6Q4U2R8 563 aa12.69□□□□□ -0.38
PFDN6-202ENST00000374607 SPIN3Q5JUX0 258 aa12.69□□□□□ -0.38
PFDN6-202ENST00000374607 ATPAF1Q5TC12 328 aaPredicted RBP12.69□□□□□ -0.38
PFDN6-202ENST00000374607 DCAF12L2Q5VW00 463 aa12.69□□□□□ -0.38
PFDN6-202ENST00000374607 WDR25Q64LD2 544 aaPredicted RBP12.69□□□□□ -0.38
PFDN6-202ENST00000374607 ZNF788Q6ZQV5 615 aa12.69□□□□□ -0.38
PFDN6-202ENST00000374607 OR4M2Q8NGB6 313 aa12.69□□□□□ -0.38
PFDN6-202ENST00000374607 OR10K1Q8NGX5 313 aa12.69□□□□□ -0.38
PFDN6-202ENST00000374607 C1orf159Q96HA4 380 aa12.69□□□□□ -0.38
PFDN6-202ENST00000374607 GAFA1Q96PS6 74 aa12.69□□□□□ -0.38
PFDN6-202ENST00000374607 OR51E2Q9H255 320 aa12.69□□□□□ -0.38
PFDN6-202ENST00000374607 PPIL3Q9H2H8 161 aaKnown RBP12.69□□□□□ -0.38
PFDN6-202ENST00000374607 CTSZQ9UBR2 303 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms