RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 TIPARPQ7Z3E1 657 aaKnown RBP12.11□□□□□ -0.47
HMGCL-203ENST00000374490 YRDCQ86U90 279 aaKnown RBP12.11□□□□□ -0.47
HMGCL-203ENST00000374490 MAFIPQ8WZ33 124 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 RRNAD1Q96FB5 475 aaKnown RBP12.11□□□□□ -0.47
HMGCL-203ENST00000374490 LRRC46Q96FV0 321 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 OR10C1Q96KK4 312 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 BBC3Q96PG8 261 aaPredicted RBP12.11□□□□□ -0.47
HMGCL-203ENST00000374490 CMSS1Q9BQ75 279 aaKnown RBP12.11□□□□□ -0.47
HMGCL-203ENST00000374490 OR2H1Q9GZK4 316 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 MS4A7Q9GZW8 240 aaPredicted RBP12.11□□□□□ -0.47
HMGCL-203ENST00000374490 MMP26Q9NRE1 261 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 ZFP57Q9NU63 452 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 FASNP49327 2511 aaKnown RBP12.11□□□□□ -0.47
HMGCL-203ENST00000374490 hCG_38984A0A1B0GV85 526 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 FAM230AA0A1W2PPH8 454 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 CYTIPO60759 359 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 FARS2O95363 451 aaKnown RBP12.11□□□□□ -0.47
HMGCL-203ENST00000374490 OR5H8P0DN80 308 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 CHATP28329 748 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 RPS18P62269 152 aaKnown RBP12.11□□□□□ -0.47
HMGCL-203ENST00000374490 RBM39Q14498 530 aaKnown RBP12.11□□□□□ -0.47
HMGCL-203ENST00000374490 FAM122CQ6P4D5 195 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 OR10D3Q8NH80 312 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 ZNF837Q96EG3 531 aaPredicted RBP12.11□□□□□ -0.47
HMGCL-203ENST00000374490 SLC5A7Q9GZV3 580 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 OR5AC2Q9NZP5 309 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 FOXJ2Q9P0K8 574 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 BOKQ9UMX3 212 aaPredicted RBP12.11□□□□□ -0.47
HMGCL-203ENST00000374490 KCNIP3Q9Y2W7 256 aa12.11□□□□□ -0.47
HMGCL-203ENST00000374490 ANKRD11Q6UB99 2663 aaPredicted RBP12.1□□□□□ -0.47
HMGCL-203ENST00000374490 TMEM218A2RU14 115 aa12.1□□□□□ -0.47
HMGCL-203ENST00000374490 KNG1P01042 644 aa12.1□□□□□ -0.47
HMGCL-203ENST00000374490 FCGR3AP08637 254 aa12.1□□□□□ -0.47
HMGCL-203ENST00000374490 HOXB5P09067 269 aa12.1□□□□□ -0.47
HMGCL-203ENST00000374490 S100A10P60903 97 aa12.1□□□□□ -0.47
HMGCL-203ENST00000374490 DEFA5Q01523 94 aa12.1□□□□□ -0.47
HMGCL-203ENST00000374490 IAH1Q2TAA2 248 aaPredicted RBP12.1□□□□□ -0.47
HMGCL-203ENST00000374490 DHRS11Q6UWP2 260 aa12.1□□□□□ -0.47
HMGCL-203ENST00000374490 DTX1Q86Y01 620 aa12.1□□□□□ -0.47
HMGCL-203ENST00000374490 OSR2Q8N2R0 312 aa12.1□□□□□ -0.47
HMGCL-203ENST00000374490 SVBPQ8N300 66 aa12.1□□□□□ -0.47
HMGCL-203ENST00000374490 OR2AE1Q8NHA4 323 aa12.1□□□□□ -0.47
HMGCL-203ENST00000374490 ADAMTS17Q8TE56 1095 aa12.1□□□□□ -0.47
HMGCL-203ENST00000374490 NARS2Q96I59 477 aaKnown RBP12.1□□□□□ -0.47
HMGCL-203ENST00000374490 NKX6-2Q9C056 277 aaPredicted RBP12.1□□□□□ -0.47
HMGCL-203ENST00000374490 WNT5BQ9H1J7 359 aa12.1□□□□□ -0.47
HMGCL-203ENST00000374490 GPR35Q9HC97 309 aa12.1□□□□□ -0.47
HMGCL-203ENST00000374490 AK3Q9UIJ7 227 aa12.1□□□□□ -0.47
HMGCL-203ENST00000374490 TUBD1Q9UJT1 453 aa12.1□□□□□ -0.47
HMGCL-203ENST00000374490 APC2O95996 2303 aa12.1□□□□□ -0.47
HMGCL-203ENST00000374490 SDK2Q58EX2 2172 aa12.09□□□□□ -0.47
HMGCL-203ENST00000374490 ZNF816-ZNF321PA0A0X1KG74 233 aa12.09□□□□□ -0.47
HMGCL-203ENST00000374490 C21orf140B9A014 251 aa12.09□□□□□ -0.47
HMGCL-203ENST00000374490 ATG12O94817 140 aa12.09□□□□□ -0.47
HMGCL-203ENST00000374490 GAPDHP04406 335 aaKnown RBP12.09□□□□□ -0.47
HMGCL-203ENST00000374490 SFTPBP07988 381 aa12.09□□□□□ -0.47
HMGCL-203ENST00000374490 ZNF728P0DKX0 622 aa12.09□□□□□ -0.47
HMGCL-203ENST00000374490 B4GALT1P15291 398 aa12.09□□□□□ -0.47
HMGCL-203ENST00000374490 CYB561P49447 251 aa12.09□□□□□ -0.47
HMGCL-203ENST00000374490 PSG4Q00888 419 aa12.09□□□□□ -0.47
HMGCL-203ENST00000374490 CEACAM16Q2WEN9 425 aa12.09□□□□□ -0.47
HMGCL-203ENST00000374490 ACER2Q5QJU3 275 aa12.09□□□□□ -0.47
HMGCL-203ENST00000374490 ROBO4Q8WZ75 1007 aa12.09□□□□□ -0.47
HMGCL-203ENST00000374490 GALNT14Q96FL9 552 aa12.09□□□□□ -0.47
HMGCL-203ENST00000374490 SUCNR1Q9BXA5 334 aa12.09□□□□□ -0.47
HMGCL-203ENST00000374490 LINC00470Q9BZP3 86 aa12.09□□□□□ -0.47
HMGCL-203ENST00000374490 SPRY4Q9C004 299 aa12.09□□□□□ -0.47
HMGCL-203ENST00000374490 PRDM14Q9GZV8 571 aa12.09□□□□□ -0.47
HMGCL-203ENST00000374490 PLEKHA2Q9HB19 425 aa12.09□□□□□ -0.47
HMGCL-203ENST00000374490 ZNF286AQ9HBT8 521 aa12.09□□□□□ -0.47
HMGCL-203ENST00000374490 GSKIPQ9P0R6 139 aa12.09□□□□□ -0.47
HMGCL-203ENST00000374490 LPAR3Q9UBY5 353 aa12.09□□□□□ -0.47
HMGCL-203ENST00000374490 DSPP15924 2871 aaKnown RBP12.09□□□□□ -0.47
HMGCL-203ENST00000374490 IGKV1D-8A0A087WSZ0 117 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 A0A0G2JMM0 328 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 A0A1W2PNU3 283 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-203ENST00000374490 A0A1W2PPB8 328 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 A0A1W2PRS3 328 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 FAM90A10PA6NDY2 464 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 FAM90A18PA6NE21 464 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 FAM90A16PA6NEW6 464 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 MSGN1A6NI15 193 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 FAM90A20PA6NIJ5 464 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 FAM90A8PA6NJQ4 464 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 FAM90A7PA6NKC0 464 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 ZNF850A8MQ14 1090 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 FAM90A22PA8MWA6 464 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 KIR3DP1A8MWS1 328 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 FAM90A12PA8MX19 464 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 FAM90A5PA8MXJ8 464 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 FAM90A23PA8MXZ1 464 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 PRSS44E7EML9 344 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 DNASE2O00115 360 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-203ENST00000374490 TPD52L2O43399 206 aaKnown RBP12.08□□□□□ -0.48
HMGCL-203ENST00000374490 SPRY1O43609 319 aaPredicted RBP12.08□□□□□ -0.48
HMGCL-203ENST00000374490 ANGPTL7O43827 346 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 TRAPPC6AO75865 159 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 TNFSF15O95150 251 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 CST4P01036 141 aa12.08□□□□□ -0.48
HMGCL-203ENST00000374490 FAM90A15PP0C7V4 464 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms