RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 KLK8O60259 260 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 ORM2P19652 201 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 OR3A4PP47883 348 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 KCNJ3P48549 501 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 SLC38A11Q08AI6 406 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 GSG1Q2KHT4 349 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 HSD17B13Q7Z5P4 300 aaPredicted RBP12.76□□□□□ -0.37
TRAF1-201ENST00000373887 CALHM3Q86XJ0 350 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 OR1B1Q8NGR6 318 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 FOXB1Q99853 325 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 POLR2AP24928 1970 aaKnown RBP12.76□□□□□ -0.37
TRAF1-201ENST00000373887 FOXL2P58012 376 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 INPP5JQ15735 1006 aaPredicted RBP12.76□□□□□ -0.37
TRAF1-201ENST00000373887 ALG14Q96F25 216 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 UBTD1Q9HAC8 227 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 EPOPA6NHQ4 379 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 DHHO43323 396 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 ZNF737O75373 536 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 TCTAP57738 103 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 TEX261Q6UWH6 196 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 ABI3BPQ7Z7G0 1075 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 RFESDQ8TAC1 157 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 LRP12Q9Y561 859 aa12.76□□□□□ -0.37
TRAF1-201ENST00000373887 FAM157AC9JC47 383 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 SRP14P37108 136 aaKnown RBP12.75□□□□□ -0.37
TRAF1-201ENST00000373887 LPAR6P43657 344 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 Q3ZCU0 254 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 TCTEX1D1Q8N7M0 179 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 CCL17Q92583 94 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 ARAP2Q8WZ64 1704 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 B2MP61769 119 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 SCGB1D4Q6XE38 83 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 Q6ZN92 141 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 SYS1Q8N2H4 156 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 FAM24BQ8N5W8 94 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 TMEM140Q9NV12 185 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 ZMIZ1Q9ULJ6 1067 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 RREB1Q92766 1687 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 SBK3P0C264 359 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 EPXP11678 715 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 MAP6Q96JE9 813 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 B9D1Q9UPM9 204 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 CDK2AP1O14519 115 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 SP1P08047 785 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 PRSS12P56730 875 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 ZNF683Q8IZ20 524 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 A0A087WUJ7 227 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 FMODQ06828 376 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 TMEM241Q24JQ0 296 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 OR6S1Q8NH40 331 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 GPX7Q96SL4 187 aaPredicted RBP12.75□□□□□ -0.37
TRAF1-201ENST00000373887 OCEL1Q9H607 264 aa12.75□□□□□ -0.37
TRAF1-201ENST00000373887 IGKV3-7A0A075B6H7 116 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 TMEM128Q5BJH2 165 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 TMEM65Q6PI78 240 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 ALG1L2C9J202 215 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 C5orf67F2Z3F1 127 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 RAE1P78406 368 aaKnown RBP12.74□□□□□ -0.37
TRAF1-201ENST00000373887 COTL1Q14019 142 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 ZNF547Q8IVP9 402 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 DYRK2Q92630 601 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 EID2BQ96D98 161 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 SRD5A3Q9H8P0 318 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 LYRM2Q9NU23 88 aaPredicted RBP12.74□□□□□ -0.37
TRAF1-201ENST00000373887 HDGFL3Q9Y3E1 203 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 CA6P23280 308 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 THBS4P35443 961 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 SMUG1Q53HV7 270 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 CCDC190Q86UF4 302 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 SFTPA2Q8IWL1 248 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 DUSP18Q8NEJ0 188 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 YIPF6Q96EC8 236 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 MMP26Q9NRE1 261 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 NGFP01138 241 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 MGPP08493 103 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 PATE4P0C8F1 98 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 TCL1AP56279 114 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 LYRM7Q5U5X0 104 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 OR5C1Q8NGR4 320 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 PECRQ9BY49 303 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 IFT22Q9H7X7 185 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 SLC25A19Q9HC21 320 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 ERRFI1Q9UJM3 462 aaPredicted RBP12.74□□□□□ -0.37
TRAF1-201ENST00000373887 SPINT1O43278 529 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 EML2O95834 649 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 ZP3P21754 424 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 GALNSP34059 522 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 DND1Q8IYX4 353 aaKnown RBP12.74□□□□□ -0.37
TRAF1-201ENST00000373887 OR10D3Q8NH80 312 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 DTD1Q8TEA8 209 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 COL4A5P29400 1685 aa12.74□□□□□ -0.37
TRAF1-201ENST00000373887 PNLIPRP3Q17RR3 467 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 IL17BQ9UHF5 180 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 ACTL6AO96019 429 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 NKG7Q16617 165 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 LYPD8Q6UX82 237 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 ARHGAP5-AS1Q96IT6 56 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 OR10C1Q96KK4 312 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 TCFL5Q9UL49 500 aa12.73□□□□□ -0.37
TRAF1-201ENST00000373887 IGHV5-10-1A0A0J9YXX1 117 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms