RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 FAM166BA8MTA8 275 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 TRAPPC2LH3BP13 241 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 CRYABP02511 175 aaKnown RBP7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 PMP2P02689 132 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 RRASP10301 218 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 ZNF35P13682 527 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 RBMXP38159 391 aaKnown RBP7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 KCNJ3P48549 501 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 SRYQ05066 204 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 PPP1R1AQ13522 171 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 ZNF169Q14929 603 aaPredicted RBP7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 KRTCAP3Q53RY4 240 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 FAM76BQ5HYJ3 339 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 LY6G6FQ5SQ64 297 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 AADACL3Q5VUY0 350 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 OR8H3Q8N146 312 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 ZNF611Q8N823 705 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 CPEB3Q8NE35 698 aaKnown RBP7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 PIGCQ92535 297 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 WBP1Q96G27 269 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 C2orf50Q96LR7 162 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 ST6GALNAC5Q9BVH7 336 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 CHIAQ9BZP6 476 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 ARL6Q9H0F7 186 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 BANF2Q9H503 90 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 BEX1Q9HBH7 125 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 PLSCR4Q9NRQ2 329 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 GPR173Q9NS66 373 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 CA10Q9NS85 328 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 EHFQ9NZC4 300 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 RCC2Q9P258 522 aaKnown RBP7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 CLCF1Q9UBD9 225 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 GLS2Q9UI32 602 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 PCDHB10Q9UN67 800 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 DNAH14Q0VDD8 3507 aa7.53□□□□□ -1.2
SNRNP40-202ENST00000373720 ANKRD34BA5PLL1 514 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 MEIS3P1A6NDR6 274 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 OR2AT4A6NND4 320 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 CD300LBA8K4G0 201 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 KRBOX1C9JBD0 128 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 E9PLN8 166 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 ARPC5O15511 151 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 BCL2L11O43521 198 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 TK1P04183 234 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 FCGR3AP08637 254 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 OR5H8P0DN80 308 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 CD79AP11912 226 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 CBR1P16152 277 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 AKR1C4P17516 323 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 M6PRP20645 277 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 COX5AP20674 150 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 VAMP1P23763 118 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 RND3P61587 244 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 PRDX4Q13162 271 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 EXOSC2Q13868 293 aaKnown RBP7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 HLXQ14774 488 aaPredicted RBP7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 SMCO1Q147U7 214 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 GUSBP1Q15486 140 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 NKPD1Q17RQ9 610 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 SPIN3Q5JUX0 258 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 OR52W1Q6IF63 320 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 PDZD9Q8IXQ8 264 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 SLC7A5P1Q8MH63 180 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 GVQW1Q8N7I0 195 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 SLC30A7Q8NEW0 376 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 OR5M9Q8NGP3 310 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 STOML3Q8TAV4 291 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 MARCH1Q8TCQ1 289 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 OR5P3Q8WZ94 311 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 IL22RA2Q969J5 263 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 RELTQ969Z4 430 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 CMBLQ96DG6 245 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 DPCDQ9BVM2 203 aaPredicted RBP7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 RTL8AQ9BWD3 113 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 PAPOLGQ9BWT3 736 aaKnown RBP7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 BCL2L14Q9BZR8 327 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 KCNK15Q9H427 330 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 C5orf66Q9H5L9 145 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 PLEKHA2Q9HB19 425 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 CHMP1AQ9HD42 196 aaPredicted RBP7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 PLA2G3Q9NZ20 509 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 PFDN2Q9UHV9 154 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 FBXO9Q9UK97 447 aaPredicted RBP7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 AMDHD2Q9Y303 409 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 TMED3Q9Y3Q3 217 aa7.52□□□□□ -1.21
SNRNP40-202ENST00000373720 LOC100509620A0A075B734 347 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 FXYD6-FXYD2A0A087WZ82 144 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 TEX13DA0A0J9YY54 714 aaPredicted RBP7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 RNF222A6NCQ9 220 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 CRYM-AS1A6NIL9 109 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 ZNF850A8MQ14 1090 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 NPIPB11E5RHQ5 1161 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 SMLR1H3BR10 107 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 WDR1O75083 606 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 TOXO94900 526 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 MPC2O95563 127 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 ZNF728P0DKX0 622 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 EDN3P14138 238 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 SDHBP21912 280 aa7.51□□□□□ -1.21
SNRNP40-202ENST00000373720 GABRR1P24046 479 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms