RNA–Protein interactions for RNA: ENST00000373387.8

GARNL3-202, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GARNL3, Length 3,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-202ENST00000373387 CLDN17P56750 224 aa6.49□□□□□ -1.37
GARNL3-202ENST00000373387 RSPO4Q2I0M5 234 aaPredicted RBP6.49□□□□□ -1.37
GARNL3-202ENST00000373387 FAM27BQ5VT28 67 aa6.49□□□□□ -1.37
GARNL3-202ENST00000373387 CLEC9AQ6UXN8 241 aa6.49□□□□□ -1.37
GARNL3-202ENST00000373387 HEPN1Q6WQI6 88 aa6.49□□□□□ -1.37
GARNL3-202ENST00000373387 C20orf196Q8IYI0 205 aa6.49□□□□□ -1.37
GARNL3-202ENST00000373387 DNASE2BQ8WZ79 361 aa6.49□□□□□ -1.37
GARNL3-202ENST00000373387 PIGTQ969N2 578 aa6.49□□□□□ -1.37
GARNL3-202ENST00000373387 FAAP24Q9BTP7 215 aa6.49□□□□□ -1.37
GARNL3-202ENST00000373387 ZNF160Q9HCG1 818 aa6.49□□□□□ -1.37
GARNL3-202ENST00000373387 SLC2A9Q9NRM0 540 aa6.49□□□□□ -1.37
GARNL3-202ENST00000373387 NECAP2Q9NVZ3 263 aa6.49□□□□□ -1.37
GARNL3-202ENST00000373387 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.48□□□□□ -1.37
GARNL3-202ENST00000373387 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.48□□□□□ -1.37
GARNL3-202ENST00000373387 OR6C6A6NF89 314 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 NTF4P34130 210 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 AKR1C3P42330 323 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 RRADP55042 308 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 RNPS1Q15287 305 aaKnown RBP6.48□□□□□ -1.37
GARNL3-202ENST00000373387 RAB30Q15771 203 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 FOXRED2Q8IWF2 684 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 OR10AD1Q8NGE0 317 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 NPRL2Q8WTW4 380 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 ZNF837Q96EG3 531 aaPredicted RBP6.48□□□□□ -1.37
GARNL3-202ENST00000373387 PLSCR2Q9NRY7 297 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 TINAGQ9UJW2 476 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 A0A087WZY1 265 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 M0R135 149 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 ZIC3O60481 467 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 CLN5O75503 358 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 ZFAND5O76080 213 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 NR2C1P13056 603 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 PNLIPP16233 465 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 SULT1A1P50225 295 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 RPS23P62266 143 aaKnown RBP6.48□□□□□ -1.37
GARNL3-202ENST00000373387 MRPS34P82930 218 aaKnown RBP6.48□□□□□ -1.37
GARNL3-202ENST00000373387 PCOLCEQ15113 449 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 SRSF7Q16629 238 aaKnown RBP eCLIP6.48□□□□□ -1.37
GARNL3-202ENST00000373387 SLC16A13Q7RTY0 426 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 PPP1R3BQ86XI6 285 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 NANPQ8TBE9 248 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 PLPPR1Q8TBJ4 325 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 ZNF799Q96GE5 643 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 S100A13Q99584 98 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 OR51M1Q9H341 326 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 ZNF701Q9NV72 531 aaPredicted RBP6.48□□□□□ -1.37
GARNL3-202ENST00000373387 LSM5Q9Y4Y9 91 aaKnown RBP6.48□□□□□ -1.37
GARNL3-202ENST00000373387 ABCA7Q8IZY2 2146 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 TLX3O43711 291 aaPredicted RBP6.48□□□□□ -1.37
GARNL3-202ENST00000373387 NME2P1O60361 137 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 TSPAN15O95858 294 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 GLP1RP43220 463 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 NHLH2Q02577 135 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 OR8B8Q15620 311 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 TMEM176BQ3YBM2 270 aaPredicted RBP6.48□□□□□ -1.37
GARNL3-202ENST00000373387 RTN4IP1Q8WWV3 396 aaPredicted RBP6.48□□□□□ -1.37
GARNL3-202ENST00000373387 ISOC2Q96AB3 205 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 MUCL1Q96DR8 90 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 TMEM56Q96MV1 263 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 SMIM3Q9BZL3 60 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 PLEKHJ1Q9NW61 149 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 ZMAT5Q9UDW3 170 aaKnown RBP6.48□□□□□ -1.37
GARNL3-202ENST00000373387 TMEM56-RWDD3S4R434 201 aa6.48□□□□□ -1.37
GARNL3-202ENST00000373387 DHHO43323 396 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 C1QL1O75973 258 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 FABP1P07148 127 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 TMEM225BP0DP42 221 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 GABRR1P24046 479 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 PPP1CCP36873 323 aaKnown RBP6.47□□□□□ -1.37
GARNL3-202ENST00000373387 POLR2GP62487 172 aaKnown RBP eCLIP6.47□□□□□ -1.37
GARNL3-202ENST00000373387 SP6Q3SY56 376 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 HIKESHIQ53FT3 197 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 FAM69BQ5VUD6 431 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 INTS12Q96CB8 462 aaKnown RBP6.47□□□□□ -1.37
GARNL3-202ENST00000373387 POM121Q96HA1 1249 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 TP53RKQ96S44 253 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 SLC35B3Q9H1N7 401 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 METTL7AQ9H8H3 244 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 SPACA1Q9HBV2 294 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 RPS10P5Q9NQ39 176 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 LUZP4Q9P127 313 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 PTRH2Q9Y3E5 179 aaKnown RBP6.47□□□□□ -1.37
GARNL3-202ENST00000373387 DMDP11532 3685 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 NSG1A0A0A6YYJ2 146 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 BORCS7-ASMTA0A0B4J1R7 106 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 RPL36A-HNRNPH2H7BZ11 118 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 S100A9P06702 114 aaKnown RBP6.47□□□□□ -1.37
GARNL3-202ENST00000373387 ZNF728P0DKX0 622 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 DUSP1P28562 367 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 HTR5AP47898 357 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 B3GALT5-AS1P59052 145 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 FABP9Q0Z7S8 132 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 RAB35Q15286 201 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 GALNTL5Q7Z4T8 443 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 FBXL14Q8N1E6 418 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 GPR137CQ8N3F9 429 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 OR1J1Q8NGS3 322 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 TMEM171Q8WVE6 324 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 TCEAL7Q9BRU2 100 aa6.47□□□□□ -1.37
GARNL3-202ENST00000373387 METTL9Q9H1A3 318 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms