RNA–Protein interactions for RNA: ENST00000373381.8

CSMD2-205, Transcript of CUB and Sushi multiple domains 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CSMD2, Length 13,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-205ENST00000373381 FOXB1Q99853 325 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 FAM208AQ9UK61 1670 aaKnown RBP8.16□□□□□ -1.1
CSMD2-205ENST00000373381 AESQ08117 197 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 ARIH2OSQ8N7S6 290 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 COL5A1-AS1Q5SY13 56 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 ZNF841Q6ZN19 808 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 P2RX4Q99571 388 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 GHRHP01286 108 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 GGTLC2Q14390 218 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 THADAQ6YHU6 1953 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 COL13A1Q5TAT6 717 aaPredicted RBP8.16□□□□□ -1.1
CSMD2-205ENST00000373381 NKX6-2Q9C056 277 aaPredicted RBP8.16□□□□□ -1.1
CSMD2-205ENST00000373381 TBC1D29Q9UFV1 150 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 TMEM262E9PQX1 116 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 HLA-GP17693 338 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 HTR6P50406 440 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 FAM109BQ6ICB4 259 aaPredicted RBP8.16□□□□□ -1.1
CSMD2-205ENST00000373381 VRK3Q8IV63 474 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 PTX4Q96A99 478 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 A0A1B0GUH1 482 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 SIX6O95475 246 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 SLC2A10O95528 541 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 B3GALT4O96024 378 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 COL8A1P27658 744 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 LSAMPQ13449 338 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 ALKBH7Q9BT30 221 aaPredicted RBP8.16□□□□□ -1.1
CSMD2-205ENST00000373381 OR2D2Q9H210 308 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 C6orf106Q9H6K1 298 aaPredicted RBP8.16□□□□□ -1.1
CSMD2-205ENST00000373381 LHX3Q9UBR4 397 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 LINC01553A4QN01 128 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 STAG3L3P0CL85 134 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 ERVFC1P60507 584 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 RSPO2Q6UXX9 243 aaPredicted RBP8.16□□□□□ -1.1
CSMD2-205ENST00000373381 ARRDC2Q8TBH0 407 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 SPSB1Q96BD6 273 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 PCYT2Q99447 389 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 MAGT1Q9H0U3 335 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 SLC25A32Q9H2D1 315 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 ISLRO14498 428 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 NMUP48645 174 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 DUSP5Q16690 384 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 LEXMQ3ZCV2 418 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 OR52I1Q8NGK6 324 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 TMEM167BQ9NRX6 74 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 A0A087WV62 115 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 FAM221AA4D161 298 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 CXorf66Q5JRM2 361 aaPredicted RBP8.16□□□□□ -1.1
CSMD2-205ENST00000373381 ZNF502Q8TBZ5 544 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 STARD4Q96DR4 205 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 TMEM38AQ9H6F2 299 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 SLC52A3Q9NQ40 469 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 PDLIM7Q9NR12 457 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 TTC28Q96AY4 2481 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 KRBA1A5PL33 1030 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 ANKRD55Q3KP44 614 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 OR2T2Q6IF00 324 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 TCTN3Q6NUS6 607 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 LRRC29Q8WV35 223 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 PRELID3AQ96N28 172 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 ELOVL1Q9BW60 279 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 IL21Q9HBE4 155 aa8.16□□□□□ -1.1
CSMD2-205ENST00000373381 MRC1P22897 1456 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 FAM106CPP0CH98 169 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 GP2P55259 537 aaKnown RBP8.15□□□□□ -1.1
CSMD2-205ENST00000373381 AKR7LQ8NHP1 331 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 OIT3Q8WWZ8 545 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 TMEM140Q9NV12 185 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 TECRQ9NZ01 308 aaKnown RBP8.15□□□□□ -1.1
CSMD2-205ENST00000373381 LIPGQ9Y5X9 500 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 OR2A25A4D2G3 310 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 RECKO95980 971 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 EMX1Q04741 257 aaPredicted RBP8.15□□□□□ -1.1
CSMD2-205ENST00000373381 SLC16A11Q8NCK7 471 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 FLYWCH2Q96CP2 140 aaKnown RBP8.15□□□□□ -1.1
CSMD2-205ENST00000373381 PCGF1Q9BSM1 259 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 MDP1Q86V88 176 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 CLN8Q9UBY8 286 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 STARD6P59095 220 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 ZNF383Q8NA42 475 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 GEMIN7Q9H840 131 aaKnown RBP8.15□□□□□ -1.1
CSMD2-205ENST00000373381 WSB2Q9NYS7 404 aaPredicted RBP8.15□□□□□ -1.1
CSMD2-205ENST00000373381 GPR45Q9Y5Y3 372 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 KIDINS220Q9ULH0 1771 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 OPN1MWP04001 364 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 OPN1MW2P0DN77 364 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 OPN1MW3P0DN78 364 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 CD68P34810 354 aaPredicted RBP8.15□□□□□ -1.1
CSMD2-205ENST00000373381 CCR6P51684 374 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 NOXO1Q8NFA2 376 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 ZNF778Q96MU6 729 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 USF3Q68DE3 2245 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 SMPD2O60906 423 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 TCTAP57738 103 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 FUT7Q11130 342 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 LIPNQ5VXI9 398 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 COL25A1Q9BXS0 654 aaPredicted RBP8.15□□□□□ -1.1
CSMD2-205ENST00000373381 ZBP1Q9H171 429 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 HSD3B7Q9H2F3 369 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 A4GNTQ9UNA3 340 aa8.15□□□□□ -1.1
CSMD2-205ENST00000373381 HES3Q5TGS1 186 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms