RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 ZNF585AQ6P3V2 769 aa20.6■□□□□ 0.89
CDK9-201ENST00000373264 PRRG4Q9BZD6 226 aa20.6■□□□□ 0.89
CDK9-201ENST00000373264 ATF4P18848 351 aaPredicted RBP20.59■□□□□ 0.89
CDK9-201ENST00000373264 NOVA1P51513 510 aaKnown RBP20.59■□□□□ 0.89
CDK9-201ENST00000373264 IAH1Q2TAA2 248 aaPredicted RBP20.59■□□□□ 0.89
CDK9-201ENST00000373264 RIPPLY2Q5TAB7 128 aa20.59■□□□□ 0.89
CDK9-201ENST00000373264 CLEC9AQ6UXN8 241 aa20.59■□□□□ 0.89
CDK9-201ENST00000373264 BAP18Q8IXM2 172 aa20.59■□□□□ 0.89
CDK9-201ENST00000373264 OSR2Q8N2R0 312 aa20.59■□□□□ 0.89
CDK9-201ENST00000373264 FGF23Q9GZV9 251 aaPredicted RBP20.59■□□□□ 0.89
CDK9-201ENST00000373264 RCC1P18754 421 aaPredicted RBP20.59■□□□□ 0.89
CDK9-201ENST00000373264 DEFA5Q01523 94 aa20.59■□□□□ 0.89
CDK9-201ENST00000373264 PHLDA2Q53GA4 152 aa20.59■□□□□ 0.89
CDK9-201ENST00000373264 SLC22A25Q6T423 547 aa20.59■□□□□ 0.89
CDK9-201ENST00000373264 TFAP2EQ6VUC0 442 aa20.59■□□□□ 0.89
CDK9-201ENST00000373264 LHFPL2Q6ZUX7 228 aa20.59■□□□□ 0.89
CDK9-201ENST00000373264 IL17BQ9UHF5 180 aa20.59■□□□□ 0.89
CDK9-201ENST00000373264 ITGA3P26006 1051 aa20.58■□□□□ 0.89
CDK9-201ENST00000373264 CLDN18P56856 261 aa20.58■□□□□ 0.89
CDK9-201ENST00000373264 PIGPP57054 158 aa20.58■□□□□ 0.89
CDK9-201ENST00000373264 SLC25A26Q70HW3 274 aa20.58■□□□□ 0.89
CDK9-201ENST00000373264 STRADBQ9C0K7 418 aa20.58■□□□□ 0.89
CDK9-201ENST00000373264 RBMXP38159 391 aaKnown RBP20.58■□□□□ 0.88
CDK9-201ENST00000373264 OR8B8Q15620 311 aa20.58■□□□□ 0.88
CDK9-201ENST00000373264 ASCL4Q6XD76 172 aa20.58■□□□□ 0.88
CDK9-201ENST00000373264 OR11L1Q8NGX0 322 aa20.58■□□□□ 0.88
CDK9-201ENST00000373264 STOML3Q8TAV4 291 aa20.58■□□□□ 0.88
CDK9-201ENST00000373264 BOKQ9UMX3 212 aaPredicted RBP20.58■□□□□ 0.88
CDK9-201ENST00000373264 RRP8O43159 456 aaKnown RBP20.57■□□□□ 0.88
CDK9-201ENST00000373264 CA11O75493 328 aa20.57■□□□□ 0.88
CDK9-201ENST00000373264 ACTL6AO96019 429 aa20.57■□□□□ 0.88
CDK9-201ENST00000373264 TPT1P13693 172 aaKnown RBP20.57■□□□□ 0.88
CDK9-201ENST00000373264 ZNF708P17019 499 aa20.57■□□□□ 0.88
CDK9-201ENST00000373264 AIMP2Q13155 320 aaKnown RBP20.57■□□□□ 0.88
CDK9-201ENST00000373264 OR1C1Q15619 314 aa20.57■□□□□ 0.88
CDK9-201ENST00000373264 IL36RNQ9UBH0 155 aa20.57■□□□□ 0.88
CDK9-201ENST00000373264 LYL1P12980 280 aa20.56■□□□□ 0.88
CDK9-201ENST00000373264 PLEKHN1Q494U1 663 aaPredicted RBP20.56■□□□□ 0.88
CDK9-201ENST00000373264 ABHD17BQ5VST6 288 aa20.56■□□□□ 0.88
CDK9-201ENST00000373264 ZNF611Q8N823 705 aa20.56■□□□□ 0.88
CDK9-201ENST00000373264 SPERTQ8NA61 448 aa20.56■□□□□ 0.88
CDK9-201ENST00000373264 CCDC54Q8NEL0 328 aa20.56■□□□□ 0.88
CDK9-201ENST00000373264 SLC30A7Q8NEW0 376 aa20.56■□□□□ 0.88
CDK9-201ENST00000373264 OR56B2PQ8NGI1 322 aa20.56■□□□□ 0.88
CDK9-201ENST00000373264 LRRC46Q96FV0 321 aa20.56■□□□□ 0.88
CDK9-201ENST00000373264 SLC5A7Q9GZV3 580 aa20.56■□□□□ 0.88
CDK9-201ENST00000373264 CRYM-AS1A6NIL9 109 aa20.56■□□□□ 0.88
CDK9-201ENST00000373264 SURF2Q15527 256 aaPredicted RBP20.56■□□□□ 0.88
CDK9-201ENST00000373264 IGFBP7Q16270 282 aa20.56■□□□□ 0.88
CDK9-201ENST00000373264 GGNBP1Q5YKI7 109 aa20.56■□□□□ 0.88
CDK9-201ENST00000373264 RPL7L1Q6DKI1 246 aaKnown RBP20.56■□□□□ 0.88
CDK9-201ENST00000373264 TTTY12Q9BZ98 90 aa20.56■□□□□ 0.88
CDK9-201ENST00000373264 TMEM231Q9H6L2 316 aa20.56■□□□□ 0.88
CDK9-201ENST00000373264 HSF4Q9ULV5 492 aa20.56■□□□□ 0.88
CDK9-201ENST00000373264 C5orf49A4QMS7 147 aa20.55■□□□□ 0.88
CDK9-201ENST00000373264 SCGB1D2O95969 90 aa20.55■□□□□ 0.88
CDK9-201ENST00000373264 CTSDP07339 412 aaPredicted RBP20.55■□□□□ 0.88
CDK9-201ENST00000373264 FCGR2CP31995 323 aa20.55■□□□□ 0.88
CDK9-201ENST00000373264 PCBD1P61457 104 aa20.55■□□□□ 0.88
CDK9-201ENST00000373264 ARL6IP1Q15041 203 aa20.55■□□□□ 0.88
CDK9-201ENST00000373264 ATP1A1-AS1Q5TC04 95 aa20.55■□□□□ 0.88
CDK9-201ENST00000373264 SGPP2Q8IWX5 399 aa20.55■□□□□ 0.88
CDK9-201ENST00000373264 FAM173AQ9BQD7 235 aa20.55■□□□□ 0.88
CDK9-201ENST00000373264 R4GN57 208 aa20.55■□□□□ 0.88
CDK9-201ENST00000373264 ZNF816-ZNF321PA0A0X1KG74 233 aa20.55■□□□□ 0.88
CDK9-201ENST00000373264 FGF16O43320 207 aa20.55■□□□□ 0.88
CDK9-201ENST00000373264 OR7C1O76099 320 aaPredicted RBP20.55■□□□□ 0.88
CDK9-201ENST00000373264 OR5AC1P0C628 307 aa20.55■□□□□ 0.88
CDK9-201ENST00000373264 FAM157CP0CG43 387 aa20.55■□□□□ 0.88
CDK9-201ENST00000373264 FUT6P51993 359 aa20.55■□□□□ 0.88
CDK9-201ENST00000373264 ZNF273Q14593 569 aa20.55■□□□□ 0.88
CDK9-201ENST00000373264 PPA1Q15181 289 aa20.55■□□□□ 0.88
CDK9-201ENST00000373264 AQP10Q96PS8 301 aa20.55■□□□□ 0.88
CDK9-201ENST00000373264 ADAT1Q9BUB4 502 aaKnown RBP20.55■□□□□ 0.88
CDK9-201ENST00000373264 PAPOLGQ9BWT3 736 aaKnown RBP20.55■□□□□ 0.88
CDK9-201ENST00000373264 C1QTNF5Q9BXJ0 243 aa20.55■□□□□ 0.88
CDK9-201ENST00000373264 SMIM3Q9BZL3 60 aa20.55■□□□□ 0.88
CDK9-201ENST00000373264 DNTTIP1Q9H147 329 aa20.55■□□□□ 0.88
CDK9-201ENST00000373264 SLC7A11Q9UPY5 501 aa20.55■□□□□ 0.88
CDK9-201ENST00000373264 FAM74A7A6NL05 159 aa20.54■□□□□ 0.88
CDK9-201ENST00000373264 FARS2O95363 451 aaKnown RBP20.54■□□□□ 0.88
CDK9-201ENST00000373264 NGFP01138 241 aa20.54■□□□□ 0.88
CDK9-201ENST00000373264 TAGLNQ01995 201 aaKnown RBP20.54■□□□□ 0.88
CDK9-201ENST00000373264 ZNF528Q3MIS6 628 aa20.54■□□□□ 0.88
CDK9-201ENST00000373264 FAM74A3Q4VXF1 159 aa20.54■□□□□ 0.88
CDK9-201ENST00000373264 DCAF10Q5QP82 559 aa20.54■□□□□ 0.88
CDK9-201ENST00000373264 OR5L1Q8NGL2 311 aa20.54■□□□□ 0.88
CDK9-201ENST00000373264 MARC2Q969Z3 335 aa20.54■□□□□ 0.88
CDK9-201ENST00000373264 NECAP2Q9NVZ3 263 aa20.54■□□□□ 0.88
CDK9-201ENST00000373264 C1orf123Q9NWV4 160 aa20.54■□□□□ 0.88
CDK9-201ENST00000373264 MRPS18CQ9Y3D5 142 aaKnown RBP20.54■□□□□ 0.88
CDK9-201ENST00000373264 LSM5Q9Y4Y9 91 aaKnown RBP20.54■□□□□ 0.88
CDK9-201ENST00000373264 HKR1P10072 659 aa20.54■□□□□ 0.88
CDK9-201ENST00000373264 CD59P13987 128 aa20.54■□□□□ 0.88
CDK9-201ENST00000373264 BCO1Q9HAY6 547 aa20.54■□□□□ 0.88
CDK9-201ENST00000373264 DSPP15924 2871 aaKnown RBP20.54■□□□□ 0.88
CDK9-201ENST00000373264 HSPB6O14558 160 aa20.53■□□□□ 0.88
CDK9-201ENST00000373264 ZNF728P0DKX0 622 aa20.53■□□□□ 0.88
CDK9-201ENST00000373264 ADCYAP1P18509 176 aa20.53■□□□□ 0.88
CDK9-201ENST00000373264 IGSF11Q5DX21 431 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms