RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 ART1P52961 327 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 SMIM21Q3B7S5 101 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 SPIN3Q5JUX0 258 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 UBE2NLQ5JXB2 153 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 FIP1L1Q6UN15 594 aaKnown RBP13.32□□□□□ -0.28
TMEM53-204ENST00000372243 ACP7Q6ZNF0 438 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 LINC00299Q6ZSB3 139 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 LINC00596Q86U02 117 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 SAMD12Q8N8I0 201 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 RAB40AQ8WXH6 277 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 FAM46BQ96A09 425 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 Q96M66 194 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 GSX2Q9BZM3 304 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 LPAR5Q9H1C0 372 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 WDR13Q9H1Z4 485 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 BANF2Q9H503 90 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 SEBOXQ9HB31 216 aaPredicted RBP13.32□□□□□ -0.28
TMEM53-204ENST00000372243 RHBDL2Q9NX52 303 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 TREM2Q9NZC2 230 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 PEX16Q9Y5Y5 336 aa13.32□□□□□ -0.28
TMEM53-204ENST00000372243 TACC2O95359 2948 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 CENPEQ02224 2701 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 FAM90A10PA6NDY2 464 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 FAM90A18PA6NE21 464 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 FAM90A16PA6NEW6 464 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 FAM90A20PA6NIJ5 464 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 FAM90A8PA6NJQ4 464 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 FAM90A7PA6NKC0 464 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 FAM90A22PA8MWA6 464 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 FAM90A12PA8MX19 464 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 FAM90A5PA8MXJ8 464 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 FAM90A23PA8MXZ1 464 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 RGS5O15539 181 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 NDUFS7O75251 213 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 FAM90A15PP0C7V4 464 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 FAM90A13PP0C7W8 464 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 FAM90A14PP0C7W9 464 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 FAM90A24PP0C7X0 464 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 MUC1P15941 1255 aaPredicted RBP13.31□□□□□ -0.28
TMEM53-204ENST00000372243 PRKACAP17612 351 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 EGR1P18146 543 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 CPT2P23786 658 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 EFNB2P52799 333 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 RBM11P57052 281 aaKnown RBP13.31□□□□□ -0.28
TMEM53-204ENST00000372243 IL13RA2Q14627 380 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 ZNF146Q15072 292 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 TEX36Q5VZQ5 186 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 LRRC28Q86X40 367 aaPredicted RBP13.31□□□□□ -0.28
TMEM53-204ENST00000372243 FAM89BQ8N5H3 189 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 SLC25A38Q96DW6 304 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 SELENOIQ9C0D9 397 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 CHODLQ9H9P2 273 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 BEX4Q9NWD9 120 aaPredicted RBP13.31□□□□□ -0.28
TMEM53-204ENST00000372243 ADAM30Q9UKF2 790 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 ST3GAL6Q9Y274 331 aa13.31□□□□□ -0.28
TMEM53-204ENST00000372243 PPIAL4EA0A075B759 164 aa13.3□□□□□ -0.28
TMEM53-204ENST00000372243 METTL21EPA6NDL7 271 aa13.3□□□□□ -0.28
TMEM53-204ENST00000372243 PPIAL4DF5H284 164 aa13.3□□□□□ -0.28
TMEM53-204ENST00000372243 WNT9BO14905 357 aa13.3□□□□□ -0.28
TMEM53-204ENST00000372243 SCGNO76038 276 aa13.3□□□□□ -0.28
TMEM53-204ENST00000372243 LY6HO94772 140 aa13.3□□□□□ -0.28
TMEM53-204ENST00000372243 KNG1P01042 644 aa13.3□□□□□ -0.28
TMEM53-204ENST00000372243 IGHV4-39P01824 125 aa13.3□□□□□ -0.28
TMEM53-204ENST00000372243 PPIAL4FP0DN26 164 aa13.3□□□□□ -0.28
TMEM53-204ENST00000372243 PTH2RP49190 550 aa13.3□□□□□ -0.28
TMEM53-204ENST00000372243 TMEM33P57088 247 aa13.3□□□□□ -0.28
TMEM53-204ENST00000372243 PLA2G7Q13093 441 aa13.3□□□□□ -0.28
TMEM53-204ENST00000372243 BATF2Q8N1L9 274 aa13.3□□□□□ -0.28
TMEM53-204ENST00000372243 NINJ1Q92982 152 aa13.3□□□□□ -0.28
TMEM53-204ENST00000372243 WDFY2Q96P53 400 aa13.3□□□□□ -0.28
TMEM53-204ENST00000372243 MIXL1Q9H2W2 232 aa13.3□□□□□ -0.28
TMEM53-204ENST00000372243 DCAF16Q9NXF7 216 aa13.3□□□□□ -0.28
TMEM53-204ENST00000372243 NLKQ9UBE8 527 aa13.3□□□□□ -0.28
TMEM53-204ENST00000372243 PLEKHA6Q9Y2H5 1048 aa13.3□□□□□ -0.28
TMEM53-204ENST00000372243 PPIAL4AQ9Y536 164 aa13.3□□□□□ -0.28
TMEM53-204ENST00000372243 A0A0A6YYH2 397 aa13.29□□□□□ -0.28
TMEM53-204ENST00000372243 OOEPA6NGQ2 149 aa13.29□□□□□ -0.28
TMEM53-204ENST00000372243 A6NJ64 397 aa13.29□□□□□ -0.28
TMEM53-204ENST00000372243 CLDN25C9JDP6 229 aa13.29□□□□□ -0.28
TMEM53-204ENST00000372243 LYNX1G3V0Z9 82 aa13.29□□□□□ -0.28
TMEM53-204ENST00000372243 H3BUI4 141 aa13.29□□□□□ -0.28
TMEM53-204ENST00000372243 LGALS8O00214 317 aa13.29□□□□□ -0.28
TMEM53-204ENST00000372243 HPGDSO60760 199 aa13.29□□□□□ -0.28
TMEM53-204ENST00000372243 CHRM2P08172 466 aa13.29□□□□□ -0.28
TMEM53-204ENST00000372243 LYNX1P0DP58 116 aa13.29□□□□□ -0.28
TMEM53-204ENST00000372243 DNASE1P24855 282 aa13.29□□□□□ -0.28
TMEM53-204ENST00000372243 S100A5P33763 92 aa13.29□□□□□ -0.28
TMEM53-204ENST00000372243 MICBQ29980 383 aa13.29□□□□□ -0.28
TMEM53-204ENST00000372243 MPV17LQ2QL34 196 aa13.29□□□□□ -0.28
TMEM53-204ENST00000372243 PEG10Q86TG7 708 aaKnown RBP13.29□□□□□ -0.28
TMEM53-204ENST00000372243 OR6Q1Q8NGQ2 317 aa13.29□□□□□ -0.28
TMEM53-204ENST00000372243 MBD6Q96DN6 1003 aa13.29□□□□□ -0.28
TMEM53-204ENST00000372243 S100A16Q96FQ6 103 aaKnown RBP13.29□□□□□ -0.28
TMEM53-204ENST00000372243 NUDT16L1Q9BRJ7 211 aaKnown RBP13.29□□□□□ -0.28
TMEM53-204ENST00000372243 IFT22Q9H7X7 185 aa13.29□□□□□ -0.28
TMEM53-204ENST00000372243 DNAJB11Q9UBS4 358 aa13.29□□□□□ -0.28
TMEM53-204ENST00000372243 AKAP6Q13023 2319 aa13.29□□□□□ -0.28
TMEM53-204ENST00000372243 NBPF19A0A087WUL8 3843 aa13.28□□□□□ -0.28
TMEM53-204ENST00000372243 TRAV38-1A0A0B4J264 116 aa13.28□□□□□ -0.28
TMEM53-204ENST00000372243 GEMIN2O14893 280 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms