RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 RFPL4AA6NLU0 287 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 RFPL4AL1F8VTS6 287 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 J3QLI3 93 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 GABRPO00591 440 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 TNFRSF13BO14836 293 aaPredicted RBP12.33□□□□□ -0.44
COL9A1-204ENST00000370496 SIGLEC5O15389 551 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 KNG1P01042 644 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 SELLP14151 372 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 PRKACAP17612 351 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 PSMB9P28065 219 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 ZNF93P35789 620 aaPredicted RBP12.33□□□□□ -0.44
COL9A1-204ENST00000370496 TGFBR2P37173 567 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 NPBWR2P48146 333 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 CEBPDP49716 269 aaPredicted RBP12.33□□□□□ -0.44
COL9A1-204ENST00000370496 CAPZA1P52907 286 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 SNU13P55769 128 aaKnown RBP12.33□□□□□ -0.44
COL9A1-204ENST00000370496 RPS25P62851 125 aaKnown RBP12.33□□□□□ -0.44
COL9A1-204ENST00000370496 INSL4Q14641 139 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 TRAM1Q15629 374 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 CHRFAM7AQ494W8 412 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 ACSM3Q53FZ2 586 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 ATPAF1Q5TC12 328 aaPredicted RBP12.33□□□□□ -0.44
COL9A1-204ENST00000370496 CD276Q5ZPR3 534 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 ZNF841Q6ZN19 808 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 ZNF788Q6ZQV5 615 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 RNF144BQ7Z419 303 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 SPARTQ8N0X7 666 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 MED30Q96HR3 178 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 NKX3-1Q99801 234 aaPredicted RBP12.33□□□□□ -0.44
COL9A1-204ENST00000370496 BEX2Q9BXY8 128 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 ELL3Q9HB65 397 aaPredicted RBP12.33□□□□□ -0.44
COL9A1-204ENST00000370496 SLC25A10Q9UBX3 287 aaPredicted RBP12.33□□□□□ -0.44
COL9A1-204ENST00000370496 ZNF222Q9UK12 451 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 FOXJ3Q9UPW0 622 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 POLR3KQ9Y2Y1 108 aaPredicted RBP12.33□□□□□ -0.44
COL9A1-204ENST00000370496 LRRC42Q9Y546 428 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 DOCK11Q5JSL3 2073 aa12.33□□□□□ -0.44
COL9A1-204ENST00000370496 IGHV2-70DA0A0C4DH43 119 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 MAGEA13PA6NCF6 341 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 F8VVB4 439 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 F8VWA3 439 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 ENSAO43768 121 aaKnown RBP12.32□□□□□ -0.44
COL9A1-204ENST00000370496 RGS9O75916 674 aaPredicted RBP12.32□□□□□ -0.44
COL9A1-204ENST00000370496 TNFAIP8O95379 198 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 MAS1P04201 325 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 ALDOBP05062 364 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 NDUFB7P17568 137 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 IGFBP3P17936 291 aaPredicted RBP12.32□□□□□ -0.44
COL9A1-204ENST00000370496 GABRA5P31644 462 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 OR3A4PP47883 348 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 ZP1P60852 638 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 HSD17B12Q53GQ0 312 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 ARMCX4Q5H9R4 360 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 FAM27D1Q5T7N8 215 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 CEACAM19Q7Z692 300 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 PHC2Q8IXK0 858 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 SAXO1Q8IYX7 474 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 FAM58AQ8N1B3 248 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 JAGN1Q8N5M9 183 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 NKAIN3Q8N8D7 197 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 ZSCAN4Q8NAM6 433 aaPredicted RBP12.32□□□□□ -0.44
COL9A1-204ENST00000370496 H1FXQ92522 213 aaKnown RBP12.32□□□□□ -0.44
COL9A1-204ENST00000370496 S100A13Q99584 98 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 MRI1Q9BV20 369 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 TCF7L1Q9HCS4 588 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 MMP26Q9NRE1 261 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 IL36RNQ9UBH0 155 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 FN1P02751 2386 aaKnown RBP12.32□□□□□ -0.44
COL9A1-204ENST00000370496 ARHGAP32A7KAX9 2087 aa12.32□□□□□ -0.44
COL9A1-204ENST00000370496 IGKV1-12A0A0C4DH73 117 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 C22orf46C9J442 243 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 PIN1P1O15428 100 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 CRLF1O75462 422 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 GPX5O75715 221 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 KDM4BO94953 1096 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 IGKV1D-12P01611 117 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 AMY2BP19961 511 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 PRDX2P32119 198 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 SRP14P37108 136 aaKnown RBP12.31□□□□□ -0.44
COL9A1-204ENST00000370496 RSU1Q15404 277 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 DGUOKQ16854 277 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 UBE2UQ5VVX9 321 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 CRIP3Q6Q6R5 217 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 BTN2A1Q7KYR7 527 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 FGFRL1Q8N441 504 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 ZNF561Q8N587 486 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 TEX29Q8N6K0 151 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 CD177Q8N6Q3 437 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 ASCC1Q8N9N2 400 aaKnown RBP12.31□□□□□ -0.44
COL9A1-204ENST00000370496 ZNRF1Q8ND25 227 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 RAB40AQ8WXH6 277 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 SDSLQ96GA7 329 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 NUDT16L1Q9BRJ7 211 aaKnown RBP12.31□□□□□ -0.44
COL9A1-204ENST00000370496 TMPRSS13Q9BYE2 586 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 SLITRK2Q9H156 845 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 C7orf69Q9H7B7 122 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 RHOFQ9HBH0 211 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 NDUFB11Q9NX14 153 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 GLS2Q9UI32 602 aa12.31□□□□□ -0.44
COL9A1-204ENST00000370496 INSIG2Q9Y5U4 225 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms