RNA–Protein interactions for RNA: ENST00000369448.3

FAM46C-201, Transcript of Putative nucleotidyltransferase FAM46C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM46C, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM46C-201ENST00000369448 CDRT15L2A8MXV6 281 aa13.18□□□□□ -0.3
FAM46C-201ENST00000369448 TLE1Q04724 770 aa13.18□□□□□ -0.3
FAM46C-201ENST00000369448 ACOT6Q3I5F7 207 aaPredicted RBP13.18□□□□□ -0.3
FAM46C-201ENST00000369448 SH3BGRL2Q9UJC5 107 aa13.18□□□□□ -0.3
FAM46C-201ENST00000369448 KCNK7Q9Y2U2 307 aa13.18□□□□□ -0.3
FAM46C-201ENST00000369448 AHCTF1Q8WYP5 2266 aa13.18□□□□□ -0.3
FAM46C-201ENST00000369448 CLDN34H7C241 214 aa13.18□□□□□ -0.3
FAM46C-201ENST00000369448 MBP02144 154 aa13.18□□□□□ -0.3
FAM46C-201ENST00000369448 THY1P04216 161 aa13.18□□□□□ -0.3
FAM46C-201ENST00000369448 THBS3P49746 956 aa13.18□□□□□ -0.3
FAM46C-201ENST00000369448 SURF2Q15527 256 aaPredicted RBP13.18□□□□□ -0.3
FAM46C-201ENST00000369448 RBMXL3Q8N7X1 1067 aaKnown RBP13.18□□□□□ -0.3
FAM46C-201ENST00000369448 MTCH1Q9NZJ7 389 aa13.18□□□□□ -0.3
FAM46C-201ENST00000369448 F6UZH7 168 aa13.18□□□□□ -0.3
FAM46C-201ENST00000369448 AQP7O14520 342 aa13.18□□□□□ -0.3
FAM46C-201ENST00000369448 YKT6O15498 198 aa13.18□□□□□ -0.3
FAM46C-201ENST00000369448 ZNF66Q6ZN08 573 aa13.18□□□□□ -0.3
FAM46C-201ENST00000369448 SARGQ9BW04 601 aa13.17□□□□□ -0.3
FAM46C-201ENST00000369448 AP4M1O00189 453 aa13.17□□□□□ -0.3
FAM46C-201ENST00000369448 PNPP00491 289 aa13.17□□□□□ -0.3
FAM46C-201ENST00000369448 NHLRC3Q5JS37 347 aa13.17□□□□□ -0.3
FAM46C-201ENST00000369448 MENTQ9BUN1 341 aa13.17□□□□□ -0.3
FAM46C-201ENST00000369448 TERTO14746 1132 aaKnown RBP13.17□□□□□ -0.3
FAM46C-201ENST00000369448 ENSAO43768 121 aaKnown RBP13.17□□□□□ -0.3
FAM46C-201ENST00000369448 FGF7P21781 194 aa13.17□□□□□ -0.3
FAM46C-201ENST00000369448 GPR12P47775 334 aa13.17□□□□□ -0.3
FAM46C-201ENST00000369448 GUSBP11Q6P575 273 aa13.17□□□□□ -0.3
FAM46C-201ENST00000369448 PUSL1Q8N0Z8 303 aaKnown RBP13.17□□□□□ -0.3
FAM46C-201ENST00000369448 WNT2BQ93097 391 aa13.17□□□□□ -0.3
FAM46C-201ENST00000369448 APOBEC3DQ96AK3 386 aaPredicted RBP13.17□□□□□ -0.3
FAM46C-201ENST00000369448 CLDN23Q96B33 292 aa13.17□□□□□ -0.3
FAM46C-201ENST00000369448 ESRP2Q9H6T0 727 aaKnown RBP13.17□□□□□ -0.3
FAM46C-201ENST00000369448 SLC25A6P12236 298 aa13.17□□□□□ -0.3
FAM46C-201ENST00000369448 OR8B8Q15620 311 aa13.17□□□□□ -0.3
FAM46C-201ENST00000369448 C1orf53Q5VUE5 145 aa13.17□□□□□ -0.3
FAM46C-201ENST00000369448 KISS1RQ969F8 398 aaPredicted RBP13.17□□□□□ -0.3
FAM46C-201ENST00000369448 TWSG1Q9GZX9 223 aa13.17□□□□□ -0.3
FAM46C-201ENST00000369448 RBFOX3A6NFN3 312 aa13.17□□□□□ -0.3
FAM46C-201ENST00000369448 CDK2AP1O14519 115 aa13.17□□□□□ -0.3
FAM46C-201ENST00000369448 RCC1P18754 421 aaPredicted RBP13.17□□□□□ -0.3
FAM46C-201ENST00000369448 UNQ9370/PRO34162Q6UXP9 181 aa13.17□□□□□ -0.3
FAM46C-201ENST00000369448 TMEM178AQ8NBL3 297 aa13.17□□□□□ -0.3
FAM46C-201ENST00000369448 YBX2Q9Y2T7 364 aaKnown RBP13.17□□□□□ -0.3
FAM46C-201ENST00000369448 LIPGQ9Y5X9 500 aa13.17□□□□□ -0.3
FAM46C-201ENST00000369448 G3V3Q6 166 aa13.16□□□□□ -0.3
FAM46C-201ENST00000369448 ABCD4O14678 606 aa13.16□□□□□ -0.3
FAM46C-201ENST00000369448 TTRP02766 147 aa13.16□□□□□ -0.3
FAM46C-201ENST00000369448 CD200P41217 278 aa13.16□□□□□ -0.3
FAM46C-201ENST00000369448 BTNL8Q6UX41 500 aa13.16□□□□□ -0.3
FAM46C-201ENST00000369448 C9orf40Q8IXQ3 194 aa13.16□□□□□ -0.3
FAM46C-201ENST00000369448 FAM210BQ96KR6 192 aa13.16□□□□□ -0.3
FAM46C-201ENST00000369448 PRO1933Q9H354 126 aa13.16□□□□□ -0.3
FAM46C-201ENST00000369448 A0A1W2PQF6 199 aa13.16□□□□□ -0.3
FAM46C-201ENST00000369448 PABPC1L2AQ5JQF8 200 aa13.16□□□□□ -0.3
FAM46C-201ENST00000369448 APOBEC4Q8WW27 367 aaKnown RBP13.16□□□□□ -0.3
FAM46C-201ENST00000369448 TECTBQ96PL2 329 aa13.16□□□□□ -0.3
FAM46C-201ENST00000369448 WNK3Q9BYP7 1800 aa13.16□□□□□ -0.3
FAM46C-201ENST00000369448 FOXL2P58012 376 aa13.16□□□□□ -0.3
FAM46C-201ENST00000369448 LYZL2Q7Z4W2 148 aa13.16□□□□□ -0.3
FAM46C-201ENST00000369448 C17orf78Q8N4C9 275 aa13.16□□□□□ -0.3
FAM46C-201ENST00000369448 OR11L1Q8NGX0 322 aa13.16□□□□□ -0.3
FAM46C-201ENST00000369448 CIB3Q96Q77 187 aaPredicted RBP13.16□□□□□ -0.3
FAM46C-201ENST00000369448 ZIC2O95409 532 aaPredicted RBP13.15□□□□□ -0.3
FAM46C-201ENST00000369448 SLC10A1Q14973 349 aa13.15□□□□□ -0.3
FAM46C-201ENST00000369448 CTRB1P17538 263 aa13.15□□□□□ -0.3
FAM46C-201ENST00000369448 GALNSP34059 522 aa13.15□□□□□ -0.3
FAM46C-201ENST00000369448 PHYHD1Q5SRE7 291 aa13.15□□□□□ -0.3
FAM46C-201ENST00000369448 CTRB2Q6GPI1 263 aa13.15□□□□□ -0.3
FAM46C-201ENST00000369448 DBX2Q6ZNG2 339 aa13.15□□□□□ -0.3
FAM46C-201ENST00000369448 PINX1Q96BK5 328 aaKnown RBP13.15□□□□□ -0.3
FAM46C-201ENST00000369448 A0A1W2PPE2 198 aa13.15□□□□□ -0.3
FAM46C-201ENST00000369448 GEMIN2O14893 280 aaKnown RBP13.15□□□□□ -0.3
FAM46C-201ENST00000369448 NTF3P20783 257 aa13.15□□□□□ -0.3
FAM46C-201ENST00000369448 PLPPR2Q96GM1 343 aa13.15□□□□□ -0.3
FAM46C-201ENST00000369448 ZNF331Q9NQX6 463 aaPredicted RBP13.15□□□□□ -0.3
FAM46C-201ENST00000369448 IGHV1OR15-9A0A0B4J2B8 117 aa13.15□□□□□ -0.3
FAM46C-201ENST00000369448 A0A1W2PP11 408 aa13.15□□□□□ -0.3
FAM46C-201ENST00000369448 SCGB2A1O75556 95 aa13.15□□□□□ -0.3
FAM46C-201ENST00000369448 PNLIPP16233 465 aa13.15□□□□□ -0.3
FAM46C-201ENST00000369448 CCL11P51671 97 aa13.15□□□□□ -0.3
FAM46C-201ENST00000369448 FGF8P55075 233 aaPredicted RBP13.15□□□□□ -0.3
FAM46C-201ENST00000369448 IGSF11Q5DX21 431 aa13.15□□□□□ -0.3
FAM46C-201ENST00000369448 LIAT1Q6ZQX7 453 aa13.15□□□□□ -0.3
FAM46C-201ENST00000369448 FAM58AQ8N1B3 248 aa13.15□□□□□ -0.3
FAM46C-201ENST00000369448 SPEM1Q8N4L4 309 aa13.15□□□□□ -0.3
FAM46C-201ENST00000369448 FAM103A1Q9BTL3 118 aaKnown RBP13.15□□□□□ -0.3
FAM46C-201ENST00000369448 CACNG5Q9UF02 275 aa13.15□□□□□ -0.3
FAM46C-201ENST00000369448 RGPD3A6NKT7 1758 aaPredicted RBP13.15□□□□□ -0.31
FAM46C-201ENST00000369448 RGPD4Q7Z3J3 1758 aa13.15□□□□□ -0.31
FAM46C-201ENST00000369448 MEX3AA1L020 520 aaKnown RBP13.15□□□□□ -0.31
FAM46C-201ENST00000369448 CCL2P13500 99 aa13.15□□□□□ -0.31
FAM46C-201ENST00000369448 SPINK2P20155 84 aa13.15□□□□□ -0.31
FAM46C-201ENST00000369448 FABP6P51161 128 aa13.15□□□□□ -0.31
FAM46C-201ENST00000369448 OR6S1Q8NH40 331 aa13.15□□□□□ -0.31
FAM46C-201ENST00000369448 RAB40CQ96S21 281 aa13.15□□□□□ -0.31
FAM46C-201ENST00000369448 SCN4AP35499 1836 aa13.14□□□□□ -0.31
FAM46C-201ENST00000369448 RAB5AP20339 215 aa13.14□□□□□ -0.31
FAM46C-201ENST00000369448 GABRA4P48169 554 aa13.14□□□□□ -0.31
FAM46C-201ENST00000369448 SULT1A1P50225 295 aa13.14□□□□□ -0.31
FAM46C-201ENST00000369448 ZP1P60852 638 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms