RNA–Protein interactions for RNA: ENST00000369409.9

PHGDH-202, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 1 (best) BASIC

Gene PHGDH, Length 1,882 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-202ENST00000369409 SCCPDHQ8NBX0 429 aa14.3□□□□□ -0.12
PHGDH-202ENST00000369409 OR56B4Q8NH76 319 aa14.3□□□□□ -0.12
PHGDH-202ENST00000369409 TMEM171Q8WVE6 324 aa14.3□□□□□ -0.12
PHGDH-202ENST00000369409 WFIKKN1Q96NZ8 548 aa14.3□□□□□ -0.12
PHGDH-202ENST00000369409 SYT3Q9BQG1 590 aa14.3□□□□□ -0.12
PHGDH-202ENST00000369409 C20orf85Q9H1P6 137 aa14.3□□□□□ -0.12
PHGDH-202ENST00000369409 ZNF107Q9UII5 783 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-202ENST00000369409 POU2F3Q9UKI9 436 aa14.3□□□□□ -0.12
PHGDH-202ENST00000369409 CHD3Q12873 2000 aaKnown RBP14.3□□□□□ -0.12
PHGDH-202ENST00000369409 TMEM210A6NLX4 147 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 F5H5P2 479 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 ABCD4O14678 606 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 OR7C1O76099 320 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-202ENST00000369409 RAB3DO95716 219 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 GRPP07492 148 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 PPP3CBP16298 524 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 PRKACAP17612 351 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 PTAFRP25105 342 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 KLF3P57682 345 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-202ENST00000369409 BSPH1Q075Z2 132 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 AGAP6Q5VW22 663 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 BTN2A1Q7KYR7 527 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 SSX8Q7RTT4 187 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 GTF3AQ92664 365 aaKnown RBP14.29□□□□□ -0.12
PHGDH-202ENST00000369409 EMG1Q92979 244 aaKnown RBP14.29□□□□□ -0.12
PHGDH-202ENST00000369409 TINAGL1Q9GZM7 467 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-202ENST00000369409 HSF4Q9ULV5 492 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 KALRNO60229 2985 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 USP24Q9UPU5 2620 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 DPRXA6NFQ7 191 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 C3orf80F5H4A9 247 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 OR51S1Q8NGJ8 323 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 OR13G1Q8NGZ3 307 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 SNAPC3Q92966 411 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 FBXW5Q969U6 566 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 SULT4A1Q9BR01 284 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 NEURL2Q9BR09 285 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 FAAP24Q9BTP7 215 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 CXXC4Q9H2H0 198 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 ANAPC10Q9UM13 185 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 ALG5Q9Y673 324 aa14.29□□□□□ -0.12
PHGDH-202ENST00000369409 CDIPTO14735 213 aa14.28□□□□□ -0.12
PHGDH-202ENST00000369409 PDCD6O75340 191 aa14.28□□□□□ -0.12
PHGDH-202ENST00000369409 IGHV3-13P01766 116 aa14.28□□□□□ -0.12
PHGDH-202ENST00000369409 CD74P04233 296 aa14.28□□□□□ -0.12
PHGDH-202ENST00000369409 AMY2AP04746 511 aa14.28□□□□□ -0.12
PHGDH-202ENST00000369409 SNTB1Q13884 538 aaKnown RBP14.28□□□□□ -0.12
PHGDH-202ENST00000369409 FBXL19-AS1Q494R0 122 aa14.28□□□□□ -0.12
PHGDH-202ENST00000369409 NHLRC3Q5JS37 347 aa14.28□□□□□ -0.12
PHGDH-202ENST00000369409 BRICD5Q6PL45 260 aa14.28□□□□□ -0.12
PHGDH-202ENST00000369409 DYRK2Q92630 601 aa14.28□□□□□ -0.12
PHGDH-202ENST00000369409 HDHD3Q9BSH5 251 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-202ENST00000369409 AK3Q9UIJ7 227 aa14.28□□□□□ -0.12
PHGDH-202ENST00000369409 POLDIP2Q9Y2S7 368 aa14.28□□□□□ -0.12
PHGDH-202ENST00000369409 RELNP78509 3460 aa14.28□□□□□ -0.12
PHGDH-202ENST00000369409 CA11O75493 328 aa14.27□□□□□ -0.12
PHGDH-202ENST00000369409 CSN2P05814 226 aa14.27□□□□□ -0.12
PHGDH-202ENST00000369409 H2AFB2P0C5Z0 115 aa14.27□□□□□ -0.12
PHGDH-202ENST00000369409 CBX5P45973 191 aa14.27□□□□□ -0.12
PHGDH-202ENST00000369409 BTG1P62324 171 aa14.27□□□□□ -0.12
PHGDH-202ENST00000369409 CDSNQ15517 529 aa14.27□□□□□ -0.12
PHGDH-202ENST00000369409 RNASE10Q5GAN6 216 aaKnown RBP14.27□□□□□ -0.12
PHGDH-202ENST00000369409 ATAD3CQ5T2N8 411 aa14.27□□□□□ -0.12
PHGDH-202ENST00000369409 PRAMEF6Q5VXH4 476 aa14.27□□□□□ -0.12
PHGDH-202ENST00000369409 SLC22A25Q6T423 547 aa14.27□□□□□ -0.12
PHGDH-202ENST00000369409 DRAXINQ8NBI3 349 aaPredicted RBP14.27□□□□□ -0.12
PHGDH-202ENST00000369409 NUP37Q8NFH4 326 aa14.27□□□□□ -0.12
PHGDH-202ENST00000369409 MAFIPQ8WZ33 124 aa14.27□□□□□ -0.12
PHGDH-202ENST00000369409 RNASE6Q93091 150 aaKnown RBP14.27□□□□□ -0.12
PHGDH-202ENST00000369409 OCSTAMPQ9BR26 566 aa14.27□□□□□ -0.12
PHGDH-202ENST00000369409 ZNF701Q9NV72 531 aaPredicted RBP14.27□□□□□ -0.12
PHGDH-202ENST00000369409 ZNF230Q9UIE0 474 aaPredicted RBP14.27□□□□□ -0.12
PHGDH-202ENST00000369409 FLVCR2Q9UPI3 526 aa14.27□□□□□ -0.12
PHGDH-202ENST00000369409 IGLV3-9A0A075B6K5 115 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 FAM90A10PA6NDY2 464 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 FAM90A18PA6NE21 464 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 FAM90A16PA6NEW6 464 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 FAM90A20PA6NIJ5 464 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 ZSCAN5BA6NJL1 495 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 FAM90A8PA6NJQ4 464 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 FAM90A7PA6NKC0 464 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 FAM90A22PA8MWA6 464 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 FAM90A12PA8MX19 464 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 FAM90A5PA8MXJ8 464 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 FAM90A23PA8MXZ1 464 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 FAM90A15PP0C7V4 464 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 FAM90A13PP0C7W8 464 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 FAM90A14PP0C7W9 464 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 FAM90A24PP0C7X0 464 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 GRNP28799 593 aaKnown RBP14.27□□□□□ -0.13
PHGDH-202ENST00000369409 HRH1P35367 487 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 MAB21L1Q13394 359 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 IKZF1Q13422 519 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 NKPD1Q17RQ9 610 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 FAM58AQ8N1B3 248 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 OR2Z1Q8NG97 314 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 LILRB4Q8NHJ6 448 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 MRPL37Q9BZE1 423 aaKnown RBP14.27□□□□□ -0.13
PHGDH-202ENST00000369409 CA10Q9NS85 328 aa14.27□□□□□ -0.13
PHGDH-202ENST00000369409 ADGRG4Q8IZF6 3080 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms