RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 IGHA2P01877 340 aa16.14■□□□□ 0.17
SNX27-202ENST00000368841 PSMB2P49721 201 aa16.14■□□□□ 0.17
SNX27-202ENST00000368841 RPEL1Q2QD12 228 aa16.14■□□□□ 0.17
SNX27-202ENST00000368841 TMEM204Q9BSN7 226 aa16.14■□□□□ 0.17
SNX27-202ENST00000368841 ASPDHA6ND91 283 aa16.14■□□□□ 0.17
SNX27-202ENST00000368841 PRSS44E7EML9 344 aa16.14■□□□□ 0.17
SNX27-202ENST00000368841 OR10AC1Q8NH08 325 aa16.14■□□□□ 0.17
SNX27-202ENST00000368841 TRAV17A0A0B4J275 112 aa16.14■□□□□ 0.17
SNX27-202ENST00000368841 TOX3O15405 576 aaPredicted RBP16.14■□□□□ 0.17
SNX27-202ENST00000368841 MBTPS2O43462 519 aa16.14■□□□□ 0.17
SNX27-202ENST00000368841 MOGAT3Q86VF5 341 aa16.14■□□□□ 0.17
SNX27-202ENST00000368841 OR2M3Q8NG83 312 aa16.14■□□□□ 0.17
SNX27-202ENST00000368841 GPR137Q96N19 417 aa16.14■□□□□ 0.17
SNX27-202ENST00000368841 LSM11P83369 360 aaKnown RBP eCLIP16.14■□□□□ 0.171e-6■■■■■ 28.9
SNX27-202ENST00000368841 FAHD1Q6P587 224 aa16.14■□□□□ 0.17
SNX27-202ENST00000368841 MMP24Q9Y5R2 645 aa16.14■□□□□ 0.17
SNX27-202ENST00000368841 KLK8O60259 260 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 RHBDL1O75783 438 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 TMEM128Q5BJH2 165 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 MED30Q96HR3 178 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 YTHDF2Q9Y5A9 579 aaKnown RBP16.13■□□□□ 0.17
SNX27-202ENST00000368841 A0A1B0GTQ1 180 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 CDKN2AP42771 156 aaKnown RBP16.13■□□□□ 0.17
SNX27-202ENST00000368841 FAM78BQ5VT40 261 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 TTC3P53804 2025 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 H3BVH4 76 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 ST8SIA5O15466 376 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 PMS2P11Q13670 270 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 GUK1Q16774 197 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 MOGAT2Q3SYC2 334 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 ATXN7O15265 892 aaPredicted RBP16.13■□□□□ 0.17
SNX27-202ENST00000368841 REG1BP48304 166 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 RAB32Q13637 225 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 RNPS1Q15287 305 aaKnown RBP16.13■□□□□ 0.17
SNX27-202ENST00000368841 LHX8Q68G74 356 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 ARL6IP6Q8N6S5 226 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 DHRS11Q6UWP2 260 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 TMEM108Q6UXF1 575 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 LINC00615Q96LM1 132 aaPredicted RBP16.13■□□□□ 0.17
SNX27-202ENST00000368841 CRISPLD2Q9H0B8 497 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 A0A0B4J2E0 115 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 A0A1B0GX12 115 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 ALX3O95076 343 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 FUT7Q11130 342 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 POM121Q96HA1 1249 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 BCL2L10Q9HD36 194 aa16.13■□□□□ 0.17
SNX27-202ENST00000368841 PNPP00491 289 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 OR4A8P0C604 315 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 FPR2P25090 351 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 ECSCRQ19T08 205 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 ZNF680Q8NEM1 530 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 GABRG3Q99928 467 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 CDK2AP1O14519 115 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 DHRS3O75911 302 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 MMP15P51511 669 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 FOXO1Q12778 655 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 FGF20Q9NP95 211 aaPredicted RBP16.12■□□□□ 0.17
SNX27-202ENST00000368841 FGF2P09038 288 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 PRRX1P54821 245 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 PNLIPRP3Q17RR3 467 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 HIKESHIQ53FT3 197 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 MUC15Q8N387 334 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 OR10D4PQ8NGN7 298 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 MOGAT1Q96PD6 335 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 CHRDL1Q9BU40 450 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 URB1O60287 2271 aaKnown RBP16.12■□□□□ 0.17
SNX27-202ENST00000368841 IGHV1OR15-9A0A0B4J2B8 117 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 HIST1H1DP16402 221 aaKnown RBP16.12■□□□□ 0.17
SNX27-202ENST00000368841 F2RL2O00254 374 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 FCN1O00602 326 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 BMI1P35226 326 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 SSPNQ14714 243 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 SRD5A3Q9H8P0 318 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 TBX21Q9UL17 535 aa16.12■□□□□ 0.17
SNX27-202ENST00000368841 SERPINE3A8MV23 424 aa16.11■□□□□ 0.17
SNX27-202ENST00000368841 FBP1P09467 338 aa16.11■□□□□ 0.17
SNX27-202ENST00000368841 NAAAQ02083 359 aa16.11■□□□□ 0.17
SNX27-202ENST00000368841 RBPMS2Q6ZRY4 209 aaKnown RBP16.11■□□□□ 0.17
SNX27-202ENST00000368841 TMEM174Q8WUU8 243 aa16.11■□□□□ 0.17
SNX27-202ENST00000368841 PATE3B3GLJ2 98 aa16.11■□□□□ 0.17
SNX27-202ENST00000368841 CD1EP15812 388 aa16.11■□□□□ 0.17
SNX27-202ENST00000368841 MUC20Q8N307 709 aaPredicted RBP16.11■□□□□ 0.17
SNX27-202ENST00000368841 SMIM12Q96EX1 92 aa16.11■□□□□ 0.17
SNX27-202ENST00000368841 U3KQ87 197 aa16.11■□□□□ 0.17
SNX27-202ENST00000368841 TMSB15BA0A087X1C1 80 aa16.11■□□□□ 0.17
SNX27-202ENST00000368841 TRBV5-4A0A0C4DH59 114 aa16.11■□□□□ 0.17
SNX27-202ENST00000368841 C9orf170A2RU37 121 aa16.11■□□□□ 0.17
SNX27-202ENST00000368841 TFPI2P48307 235 aa16.11■□□□□ 0.17
SNX27-202ENST00000368841 RAB1BQ9H0U4 201 aa16.11■□□□□ 0.17
SNX27-202ENST00000368841 FLRT3Q9NZU0 649 aa16.11■□□□□ 0.17
SNX27-202ENST00000368841 SLC17A2O00624 439 aa16.11■□□□□ 0.17
SNX27-202ENST00000368841 TRAT1Q6PIZ9 186 aa16.11■□□□□ 0.17
SNX27-202ENST00000368841 CBLN3Q6UW01 205 aa16.11■□□□□ 0.17
SNX27-202ENST00000368841 OR1K1Q8NGR3 316 aa16.11■□□□□ 0.17
SNX27-202ENST00000368841 CCL4P13236 92 aa16.11■□□□□ 0.17
SNX27-202ENST00000368841 GLDNQ6ZMI3 551 aaPredicted RBP16.11■□□□□ 0.17
SNX27-202ENST00000368841 OR13G1Q8NGZ3 307 aa16.11■□□□□ 0.17
SNX27-202ENST00000368841 SSMEM1Q8WWF3 244 aa16.11■□□□□ 0.17
SNX27-202ENST00000368841 TEX50A0A1B0GTY4 177 aa16.11■□□□□ 0.17
SNX27-202ENST00000368841 C9orf172C9J069 976 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms