RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 RBP2P50120 134 aa12.54□□□□□ -0.4
SMPDL3A-201ENST00000368440 ACSM1Q08AH1 577 aa12.54□□□□□ -0.4
SMPDL3A-201ENST00000368440 IL24Q13007 206 aa12.54□□□□□ -0.4
SMPDL3A-201ENST00000368440 TMEM106AQ96A25 262 aa12.54□□□□□ -0.4
SMPDL3A-201ENST00000368440 SLAMF9Q96A28 289 aa12.54□□□□□ -0.4
SMPDL3A-201ENST00000368440 NRIP2Q9BQI9 281 aa12.54□□□□□ -0.4
SMPDL3A-201ENST00000368440 MTCH1Q9NZJ7 389 aa12.54□□□□□ -0.4
SMPDL3A-201ENST00000368440 CLN8Q9UBY8 286 aa12.54□□□□□ -0.4
SMPDL3A-201ENST00000368440 POLDIP2Q9Y2S7 368 aa12.54□□□□□ -0.4
SMPDL3A-201ENST00000368440 POLR3KQ9Y2Y1 108 aaPredicted RBP12.54□□□□□ -0.4
SMPDL3A-201ENST00000368440 DOCK11Q5JSL3 2073 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 SMIM30A4D0T7 59 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 NDUFA2O43678 99 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 SULT1B1O43704 296 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 NOS1APO75052 506 aaPredicted RBP12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 AVPP01185 164 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 PRKACBP22694 351 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 POU3F4P49335 361 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 ATP1B3P54709 279 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 MTCP1P56278 107 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 PAX2Q02962 417 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 MXD1Q05195 221 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 ZNF529Q6P280 563 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 FAHD2BQ6P2I3 314 aaPredicted RBP12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 ACP7Q6ZNF0 438 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 C1orf229Q6ZS94 237 aaPredicted RBP12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 LHFPL2Q6ZUX7 228 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 USP43Q70EL4 1123 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 SLC25A26Q70HW3 274 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 ANGPTL6Q8NI99 470 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 SPSB1Q96BD6 273 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 FAHD2AQ96GK7 314 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 TMPRSS13Q9BYE2 586 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 TXNL4BQ9NX01 149 aaKnown RBP12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 KAAG1Q9UBP8 84 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 ZNF222Q9UK12 451 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 IGKV1D-17A0A075B6S4 117 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 OR2AT4A6NND4 320 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 DVL1O14640 695 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 SPRY1O43609 319 aaPredicted RBP12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 OCMP0CE72 109 aaPredicted RBP12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 PSG2P11465 335 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 ERVK11-1P61568 191 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 BDH1Q02338 343 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 LSAMPQ13449 338 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 YIF1BQ5BJH7 314 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 DCAF12L2Q5VW00 463 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 OR5D18Q8NGL1 313 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 OR5D14Q8NGL3 314 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 DACT3Q96B18 629 aaPredicted RBP12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 GAFA1Q96PS6 74 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 OR14A2Q96R54 314 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 NKX3-1Q99801 234 aaPredicted RBP12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 SHARPINQ9H0F6 387 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 HES4Q9HCC6 221 aa12.53□□□□□ -0.4
SMPDL3A-201ENST00000368440 CUBNO60494 3623 aa12.52□□□□□ -0.4
SMPDL3A-201ENST00000368440 A0A0G2JMP0 313 aa12.52□□□□□ -0.41
SMPDL3A-201ENST00000368440 A0A0X1KG70 313 aa12.52□□□□□ -0.41
SMPDL3A-201ENST00000368440 C22orf46C9J442 243 aa12.52□□□□□ -0.41
SMPDL3A-201ENST00000368440 GABRPO00591 440 aa12.52□□□□□ -0.41
SMPDL3A-201ENST00000368440 CD2P06729 351 aa12.52□□□□□ -0.41
SMPDL3A-201ENST00000368440 HCKP08631 526 aa12.52□□□□□ -0.41
SMPDL3A-201ENST00000368440 CPT2P23786 658 aa12.52□□□□□ -0.41
SMPDL3A-201ENST00000368440 CEBPDP49716 269 aaPredicted RBP12.52□□□□□ -0.41
SMPDL3A-201ENST00000368440 Q499Y3 187 aa12.52□□□□□ -0.41
SMPDL3A-201ENST00000368440 ZNF788Q6ZQV5 615 aa12.52□□□□□ -0.41
SMPDL3A-201ENST00000368440 OR4M2Q8NGB6 313 aa12.52□□□□□ -0.41
SMPDL3A-201ENST00000368440 DYNC2LI1Q8TCX1 351 aa12.52□□□□□ -0.41
SMPDL3A-201ENST00000368440 OR5V1Q9UGF6 321 aa12.52□□□□□ -0.41
SMPDL3A-201ENST00000368440 A0A1W2PPK0 400 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 ANGPTL7O43827 346 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 NXPH2O95156 264 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 CD1AP06126 327 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 RAB3AP20336 220 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 NPBWR2P48146 333 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 IKZF1Q13422 519 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 DGUOKQ16854 277 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 CHRFAM7AQ494W8 412 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 ATPAF1Q5TC12 328 aaPredicted RBP12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 CEP19Q96LK0 163 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 BEX2Q9BXY8 128 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 RASL12Q9NYN1 266 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 METRNQ9UJH8 293 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 CDC42EP3Q9UKI2 254 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 INSIG2Q9Y5U4 225 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 TRAV8-7A0A075B6U6 113 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 TRBV5-7A0A0A0MS05 114 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 PPIAL4CA0A0B4J2A2 164 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 IGHV2-70DA0A0C4DH43 119 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 IGKV1-12A0A0C4DH73 117 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 RGS9O75916 674 aaPredicted RBP12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 ALX3O95076 343 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 CDRT1O95170 752 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 IGKV1D-12P01611 117 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 ACAA1P09110 424 aaPredicted RBP12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 BCL3P20749 454 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 GABRA2P47869 451 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 PDZK1IP1Q13113 114 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 SMIM21Q3B7S5 101 aa12.51□□□□□ -0.41
SMPDL3A-201ENST00000368440 SLC36A1Q7Z2H8 476 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms