RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 RIGQ13278 110 aa3.36□□□□□ -1.87
SYNE1-207ENST00000367255 FOXB2Q5VYV0 432 aa3.36□□□□□ -1.87
SYNE1-207ENST00000367255 RNASEKQ6P5S7 137 aaKnown RBP3.36□□□□□ -1.87
SYNE1-207ENST00000367255 FADS6Q8N9I5 356 aa3.36□□□□□ -1.87
SYNE1-207ENST00000367255 NPEPL1Q8NDH3 523 aa3.36□□□□□ -1.87
SYNE1-207ENST00000367255 DTD1Q8TEA8 209 aa3.36□□□□□ -1.87
SYNE1-207ENST00000367255 EWSR1Q01844 656 aaKnown RBP eCLIP3.35□□□□□ -1.87
SYNE1-207ENST00000367255 ZP4Q12836 540 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 MRPL23Q16540 153 aaKnown RBP3.35□□□□□ -1.87
SYNE1-207ENST00000367255 SLC25A34Q6PIV7 304 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF101Q8IZC7 436 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 CMTM8Q8IZV2 173 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 SCNM1Q9BWG6 230 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 EGLN3Q9H6Z9 239 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 H2BFMP0C1H6 154 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 GPR183P32249 361 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 EIF4EBP1Q13541 118 aaPredicted RBP3.35□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF627Q7L945 461 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 APOBEC3DQ96AK3 386 aaPredicted RBP3.35□□□□□ -1.87
SYNE1-207ENST00000367255 BOCQ9BWV1 1114 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 LYRM9A8MSI8 78 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 MPZL1O95297 269 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 CRYBB3P26998 211 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 PTTG1IPP53801 180 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 AGERQ15109 404 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 MARCH8Q5T0T0 291 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 ASCL5Q7RTU5 278 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 BIVMQ86UB2 503 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 VASH2Q86V25 355 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 ALKBH3Q96Q83 286 aaPredicted RBP3.35□□□□□ -1.87
SYNE1-207ENST00000367255 APODP05090 189 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 MRPL3P09001 348 aaKnown RBP3.35□□□□□ -1.87
SYNE1-207ENST00000367255 KIR2DL3P43628 341 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 DIO3P55073 304 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 CCL15Q16663 113 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF750Q32MQ0 723 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 SIRPB2Q5JXA9 342 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 DACT2Q5SW24 774 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 BCL6BQ8N143 479 aaPredicted RBP3.35□□□□□ -1.87
SYNE1-207ENST00000367255 HSD17B8Q92506 261 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF346Q9UL40 294 aaKnown RBP3.35□□□□□ -1.87
SYNE1-207ENST00000367255 ABT1Q9ULW3 272 aaKnown RBP3.35□□□□□ -1.87
SYNE1-207ENST00000367255 CD38P28907 300 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 STUMQ69YW2 141 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 Q6ZVH6 145 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 MMABQ96EY8 250 aaPredicted RBP3.35□□□□□ -1.87
SYNE1-207ENST00000367255 H7C1H1 209 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF385AQ96PM9 386 aaKnown RBP3.35□□□□□ -1.87
SYNE1-207ENST00000367255 CSTAP01040 98 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 SFTPBP07988 381 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 CELF2-AS1Q8N7Q2 184 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF250P15622 560 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 FCGR2BP31994 310 aaPredicted RBP3.35□□□□□ -1.87
SYNE1-207ENST00000367255 FAM213BQ8TBF2 198 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 CLEC2DQ9UHP7 191 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 OR2A1Q8NGT9 310 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 CPT1CQ8TCG5 803 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 MARCH1Q8TCQ1 289 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 TAAR6Q96RI8 345 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 SPSB2Q99619 263 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 VN1R1Q9GZP7 353 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 UBTD1Q9HAC8 227 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 EMCNQ9ULC0 261 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 MYH7BA7E2Y1 1941 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 SRFP11831 508 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 LYL1P12980 280 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 METAP1P53582 386 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 D2HGDHQ8N465 521 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 OR6C1Q96RD1 312 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 NEU1Q99519 415 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 MYO5BQ9ULV0 1848 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 IGHV3-64DA0A0J9YX35 117 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 RAET1LQ5VY80 246 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 TAS1R1Q7RTX1 841 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 SMIM3Q9BZL3 60 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 ULBP2Q9BZM5 246 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF223Q9UK11 482 aaPredicted RBP3.35□□□□□ -1.87
SYNE1-207ENST00000367255 TRA2AQ13595 282 aaKnown RBP eCLIP3.35□□□□□ -1.87
SYNE1-207ENST00000367255 MORN2Q502X0 79 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF506Q5JVG8 444 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 LRRC75AQ8NAA5 344 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 DMBX1Q8NFW5 382 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 GLI4P10075 376 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 SELPP16109 830 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 CDC20BQ86Y33 519 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 MORN4Q8NDC4 146 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 SLC38A5Q8WUX1 472 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 IFI27L2Q9H2X8 130 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 A0A1W2PQH9 124 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 A8MWL6 223 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 EDDM3AQ14507 147 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 SPRYD7Q5W111 196 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 ZNF880Q6PDB4 577 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 SH2D2AQ9NP31 389 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 GABRQQ9UN88 632 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 FAM3CQ92520 227 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.35□□□□□ -1.87
SYNE1-207ENST00000367255 PEX11BO96011 259 aa3.35□□□□□ -1.87
SYNE1-207ENST00000367255 EXOSC7Q15024 291 aaKnown RBP3.35□□□□□ -1.87
SYNE1-207ENST00000367255 RNF133Q8WVZ7 376 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms