RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 MTCP1P56278 107 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 SMN1Q16637 294 aaKnown RBP7.73□□□□□ -1.17
SYNE1-206ENST00000367253 DCAF12L2Q5VW00 463 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 RPUSD3Q6P087 351 aaKnown RBP7.73□□□□□ -1.17
SYNE1-206ENST00000367253 KCNG3Q8TAE7 436 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 SECTM1Q8WVN6 248 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 FAAP24Q9BTP7 215 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 ABHD6Q9BV23 337 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 RAB6CQ9H0N0 254 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 ELF5Q9UKW6 265 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-206ENST00000367253 PHF1O43189 567 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-206ENST00000367253 C1orf105O95561 183 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 S100A4P26447 101 aaKnown RBP7.73□□□□□ -1.17
SYNE1-206ENST00000367253 ELLP55199 621 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-206ENST00000367253 ADPRMQ3LIE5 342 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 CENPVQ7Z7K6 275 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-206ENST00000367253 SCD5Q86SK9 330 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 PQLC3Q8N755 202 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 RPUSD4Q96CM3 377 aaKnown RBP7.73□□□□□ -1.17
SYNE1-206ENST00000367253 ZG16BQ96DA0 208 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 NUDT22Q9BRQ3 303 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 OR52D1Q9H346 318 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 GEMIN7Q9H840 131 aaKnown RBP7.73□□□□□ -1.17
SYNE1-206ENST00000367253 ADAMTSL1Q8N6G6 1762 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 CXorf51AA0A1B0GTR3 108 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 PQLC2LA1A4F0 135 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 KDM4EB2RXH2 506 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-206ENST00000367253 KCNAB3O43448 404 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 ADAM20O43506 726 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 RPS25P62851 125 aaKnown RBP7.73□□□□□ -1.17
SYNE1-206ENST00000367253 HERV-K104P63124 156 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 SLC10A2Q12908 348 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-206ENST00000367253 GAB4Q2WGN9 574 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 CXorf66Q5JRM2 361 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-206ENST00000367253 LETMD1Q6P1Q0 360 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 OR4F5Q8NH21 305 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 BAHD1Q8TBE0 780 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-206ENST00000367253 OR4F4Q96R69 305 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 HEYLQ9NQ87 328 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-206ENST00000367253 PSORS1C1Q9UIG5 152 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 SCN4AP35499 1836 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 ZNF354AO60765 605 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-206ENST00000367253 HOXC4P09017 264 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-206ENST00000367253 CTXN2P0C2S0 81 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 CD22P20273 847 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 DCTDP32321 178 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 PPICP45877 212 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 WNT7BP56706 349 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 PLAURQ03405 335 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 FAHD1Q6P587 224 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 UBE3DQ7Z6J8 389 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 LHX4Q969G2 390 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 REPIN1Q9BWE0 567 aaKnown RBP7.73□□□□□ -1.17
SYNE1-206ENST00000367253 A4GNTQ9UNA3 340 aa7.73□□□□□ -1.17
SYNE1-206ENST00000367253 KIR2DS1A0A191URI9 304 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 ARNTLO00327 626 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 FZD6O60353 706 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 TNFRSF6BO95407 300 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 CTSLP07711 333 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 PRR35P0CG20 571 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 KIR2DS4P43632 304 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 ROM1Q03395 351 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 SEMA3BQ13214 749 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 KIR2DS1Q14954 304 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 DMRTC1Q5HYR2 192 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 FAM57BQ71RH2 274 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 SEH1LQ96EE3 360 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 POFUT1Q9H488 388 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 DMRT3Q9NQL9 472 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 TAAR3PQ9P1P4 343 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 CDC42EP3Q9UKI2 254 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 CSAG2Q9Y5P2 127 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 MYH15Q9Y2K3 1946 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 C7orf72A4D263 438 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 TMEM212A6NML5 194 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 CDC14BO60729 498 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 MGMTP16455 207 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 ADRA2CP18825 462 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 CR2P20023 1033 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 UCP1P25874 307 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 DRD3P35462 400 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 CLDN12P56749 244 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 GPNMBQ14956 572 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 ALKBH6Q3KRA9 238 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 FOXB2Q5VYV0 432 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 TRAT1Q6PIZ9 186 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 Q8IYB0 196 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 OR2I1PQ8NGU4 316 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 FOXJ3Q9UPW0 622 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 MSRB2Q9Y3D2 182 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 SIGLEC5O15389 551 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 SRD5A2P31213 254 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 NKX2-1P43699 371 aaPredicted RBP7.72□□□□□ -1.17
SYNE1-206ENST00000367253 GGTA1PQ4G0N0 100 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 NHLRC1Q6VVB1 395 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 OR2M7Q8NG81 312 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 OR51A2Q8NGJ7 313 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 GTF3AQ92664 365 aaKnown RBP7.72□□□□□ -1.17
SYNE1-206ENST00000367253 SLC22A12Q96S37 553 aa7.72□□□□□ -1.17
SYNE1-206ENST00000367253 SOX7Q9BT81 388 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms