RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 ARL3P36405 182 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 LINC00596Q86U02 117 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 CRLF2Q9HC73 371 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 NKX6-3A6NJ46 265 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 ZNF98A6NK75 572 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 HS3ST1O14792 307 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 GABRA2P47869 451 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 PLGLAQ15195 96 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 CD226Q15762 336 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 PHYHD1Q5SRE7 291 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 PRAMEF5Q5TYX0 476 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 PRAMEF6Q5VXH4 476 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 KLHDC1Q8N7A1 406 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 SF3B5Q9BWJ5 86 aaKnown RBP10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 LHX9Q9NQ69 397 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 FAM96BQ9Y3D0 163 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 APOA2P02652 100 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 NQO2P16083 231 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 SNRPEP62304 92 aaKnown RBP10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 ZNF90Q03938 601 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 TMEM211Q6ICI0 200 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 SIRT4Q9Y6E7 314 aaPredicted RBP10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 G3V3Y1 287 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 NAT2P11245 290 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 TCTN1Q2MV58 587 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 TEX30Q5JUR7 227 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 RPL7L1Q6DKI1 246 aaKnown RBP10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 C6orf15Q6UXA7 325 aaPredicted RBP10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 TRBV5-7A0A0A0MS05 114 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 C5orf67F2Z3F1 127 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 OR3A4PP47883 348 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 LBX1P52954 281 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 RPUSD4Q96CM3 377 aaKnown RBP10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 S1PR3Q99500 378 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 MAGT1Q9H0U3 335 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 PLXNA4Q9HCM2 1894 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 A0A1W2PPQ1 181 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 MPTX1A8MV57 137 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 KLF4O43474 513 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 BGLAPP02818 100 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 ABOP16442 354 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 FUT5Q11128 374 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 COX19Q49B96 90 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 AWAT1Q58HT5 328 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 C1orf100Q5SVJ3 147 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 NPAS1Q99742 590 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 OCIAD1Q9NX40 245 aa10.47□□□□□ -0.73
CDC42BPA-202ENST00000366764 BPIFB3P59826 476 aa10.46□□□□□ -0.73
CDC42BPA-202ENST00000366764 C20orf196Q8IYI0 205 aa10.46□□□□□ -0.73
CDC42BPA-202ENST00000366764 YBX2Q9Y2T7 364 aaKnown RBP10.46□□□□□ -0.73
CDC42BPA-202ENST00000366764 PLXNA2O75051 1894 aa10.46□□□□□ -0.73
CDC42BPA-202ENST00000366764 A0A0U1RQV5 110 aa10.46□□□□□ -0.73
CDC42BPA-202ENST00000366764 CXorf65A6NEN9 183 aa10.46□□□□□ -0.73
CDC42BPA-202ENST00000366764 RBMXL3Q8N7X1 1067 aaKnown RBP10.46□□□□□ -0.73
CDC42BPA-202ENST00000366764 OR10G3Q8NGC4 313 aa10.46□□□□□ -0.73
CDC42BPA-202ENST00000366764 RDH5Q92781 318 aa10.46□□□□□ -0.73
CDC42BPA-202ENST00000366764 CLDN23Q96B33 292 aa10.46□□□□□ -0.73
CDC42BPA-202ENST00000366764 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.46□□□□□ -0.73
CDC42BPA-202ENST00000366764 LIAT1Q6ZQX7 453 aa10.46□□□□□ -0.73
CDC42BPA-202ENST00000366764 HOGA1Q86XE5 327 aa10.46□□□□□ -0.73
CDC42BPA-202ENST00000366764 STARD10Q9Y365 291 aa10.46□□□□□ -0.73
CDC42BPA-202ENST00000366764 GTF3C1Q12789 2109 aa10.46□□□□□ -0.73
CDC42BPA-202ENST00000366764 TMEM30CPA0ZSE6 113 aa10.46□□□□□ -0.73
CDC42BPA-202ENST00000366764 OR5AC1P0C628 307 aa10.46□□□□□ -0.73
CDC42BPA-202ENST00000366764 CXCL2P19875 107 aa10.46□□□□□ -0.73
CDC42BPA-202ENST00000366764 CRYBA2P53672 197 aa10.46□□□□□ -0.73
CDC42BPA-202ENST00000366764 FAM3AP98173 230 aa10.46□□□□□ -0.73
CDC42BPA-202ENST00000366764 SLC35E1Q96K37 410 aa10.46□□□□□ -0.73
CDC42BPA-202ENST00000366764 CA10Q9NS85 328 aa10.46□□□□□ -0.73
CDC42BPA-202ENST00000366764 TPPP2P59282 170 aa10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 NANOS3P60323 173 aaKnown RBP10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 MICBQ29980 383 aa10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 TRAV20A0A0B4J274 112 aa10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 GATCO43716 136 aaKnown RBP10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 C9orf135Q5VTT2 229 aa10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 ZNF660Q6AZW8 331 aaPredicted RBP10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 RHBDD2Q6NTF9 364 aa10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 ZNF705AQ6ZN79 300 aaPredicted RBP10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 ST8SIA5O15466 376 aa10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 CD8AP01732 235 aa10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 OR8B12Q8NGG6 310 aa10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 HLA-CQ95604 372 aa10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 ERGIC1Q969X5 290 aa10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 ADGRG7Q96K78 797 aa10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 PECRQ9BY49 303 aa10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 EGLN1Q9GZT9 426 aa10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 ZMAT5Q9UDW3 170 aaKnown RBP10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 CHD3Q12873 2000 aaKnown RBP10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 TMEM241Q24JQ0 296 aa10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 AARDQ4LEZ3 155 aa10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 UBAC2Q8NBM4 344 aa10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 IER2Q9BTL4 223 aa10.46□□□□□ -0.74
CDC42BPA-202ENST00000366764 C3orf85A0A1B0GTC6 90 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 ADH4P08319 380 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 A0A1W2PPC1 479 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 PMS2P1A4D2B8 440 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 GLI4P10075 376 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 GPM6AP51674 278 aa10.45□□□□□ -0.74
CDC42BPA-202ENST00000366764 PLXNB3Q9ULL4 1909 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms