RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 CEACAM21Q3KPI0 293 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 KRT74Q7RTS7 529 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 TIGD4Q8IY51 512 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 STPG2Q8N412 459 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 RPP25LQ8N5L8 163 aaKnown RBP6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 ZNF676Q8N7Q3 588 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 RNF152Q8N8N0 203 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 PROKR2Q8NFJ6 384 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 OR8J3Q8NGG0 315 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 RNF133Q8WVZ7 376 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 CAPSLQ8WWF8 208 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 C7orf26Q96N11 449 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 ZNF714Q96N38 554 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 NRIP2Q9BQI9 281 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 IFT27Q9BW83 186 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 NDEL1Q9GZM8 345 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 FAM192AQ9GZU8 254 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 ANKRD19PQ9H560 264 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 RETNQ9HD89 108 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 C19orf73Q9NVV2 129 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 OR14J1Q9UGF5 321 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 MOB4Q9Y3A3 225 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 ENPP4Q9Y6X5 453 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 HSPE1-MOB4S4R3N1 261 aa6.59□□□□□ -1.35
HMGB1P39-201ENST00000366304 FAM90A18PA6NE21 464 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 FAM90A16PA6NEW6 464 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 FAM90A20PA6NIJ5 464 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 FAM90A9PA6NNJ1 464 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 FAM90A12PA8MX19 464 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 FAM90A5PA8MXJ8 464 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 FAM220BPB1ANY3 271 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 CCRL2O00421 344 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 ZNF682O95780 498 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 IGHG2P01859 326 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 H1F0P07305 194 aaKnown RBP6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 FAM90A15PP0C7V4 464 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 FAM90A13PP0C7W8 464 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 FAM90A14PP0C7W9 464 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 FAM90A24PP0C7X0 464 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 IGHV4-30-4P0DP06 118 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 GP9P14770 177 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 SLC6A6P31641 620 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 IFNA8P32881 189 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 OPRL1P41146 370 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 CDX1P47902 265 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 GRB2P62993 217 aaKnown RBP6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 BDH1Q02338 343 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 CFHR3Q02985 330 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 KIAA0141Q14154 515 aaPredicted RBP6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 DIAPH2-AS1Q14236 149 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 FGD3Q5JSP0 725 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 TEX30Q5JUR7 227 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 TPTE2P1Q5T6R2 138 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 PRAMEF5Q5TYX0 476 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 ERICH5Q6P6B1 374 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 ABHD12Q8N2K0 398 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 OR8B12Q8NGG6 310 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 OR4C15Q8NGM1 316 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 OR52J3Q8NH60 311 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 GATAD1Q8WUU5 269 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 DDB2Q92466 427 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 PGAM5Q96HS1 289 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 ABHD6Q9BV23 337 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 OR10A2Q9H208 303 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 ZNF286AQ9HBT8 521 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 ISYNA1Q9NPH2 558 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 NDUFAF4Q9P032 175 aa6.58□□□□□ -1.36
HMGB1P39-201ENST00000366304 M0QZK8 103 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 NOS1APO75052 506 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 NXPH2O95156 264 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 FAM107AO95990 144 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 CFL1P23528 166 aaKnown RBP6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 BRS3P32247 399 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 ERVK11-1P61568 191 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 GNGT1P63211 74 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 IL18R1Q13478 541 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 CYLC2Q14093 348 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 EDDM3AQ14507 147 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 HNF4GQ14541 408 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 SRSF7Q16629 238 aaKnown RBP eCLIP6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 HAGHQ16775 308 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 IFI44LQ53G44 452 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 LINC01590Q5TEZ4 76 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 RRM2BQ7LG56 351 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 SLC35E3Q7Z769 313 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 HAPLN4Q86UW8 402 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 COMMD1Q8N668 190 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 ASCC1Q8N9N2 400 aaKnown RBP6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 ZBTB8BQ8NAP8 495 aaPredicted RBP6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 SLC37A3Q8NCC5 494 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 OR2T12Q8NG77 320 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 OR11H1Q8NG94 326 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 OR52N4Q8NGI2 321 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 OR8D4Q8NGM9 314 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 ZNF671Q8TAW3 534 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 C4orf3Q8WVX3 66 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 DHRS1Q96LJ7 313 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 NABP2Q9BQ15 211 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 KRTAP4-5Q9BYR2 181 aa6.57□□□□□ -1.36
HMGB1P39-201ENST00000366304 NMNAT2Q9BZQ4 307 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms