RNA–Protein interactions for RNA: ENST00000366290.2

YBX3-204, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-204ENST00000366290 ZNF540Q8NDQ6 660 aa6.52□□□□□ -1.37
YBX3-204ENST00000366290 SLAMF6Q96DU3 332 aa6.52□□□□□ -1.37
YBX3-204ENST00000366290 ABHD1Q96SE0 405 aa6.52□□□□□ -1.37
YBX3-204ENST00000366290 HDHD2Q9H0R4 259 aa6.52□□□□□ -1.37
YBX3-204ENST00000366290 CLN6Q9NWW5 311 aa6.52□□□□□ -1.37
YBX3-204ENST00000366290 ATPIF1Q9UII2 106 aa6.52□□□□□ -1.37
YBX3-204ENST00000366290 RAB26Q9ULW5 256 aa6.52□□□□□ -1.37
YBX3-204ENST00000366290 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.52□□□□□ -1.37
YBX3-204ENST00000366290 WNK2Q9Y3S1 2297 aa6.52□□□□□ -1.37
YBX3-204ENST00000366290 NBEAL1Q6ZS30 2694 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 A0A1W2PQL4 384 aaPredicted RBP6.51□□□□□ -1.37
YBX3-204ENST00000366290 C5orf49A4QMS7 147 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 ZNF878C9JN71 531 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 MAGEB4O15481 346 aaPredicted RBP6.51□□□□□ -1.37
YBX3-204ENST00000366290 XPNPEP2O43895 674 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 LY6HO94772 140 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 NGFP01138 241 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 IGHV3-13P01766 116 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 LYNP07948 512 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 ERCC1P07992 297 aaPredicted RBP6.51□□□□□ -1.37
YBX3-204ENST00000366290 ACSM4P0C7M7 580 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 USF1P22415 310 aaPredicted RBP6.51□□□□□ -1.37
YBX3-204ENST00000366290 TUBG1P23258 451 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 APLNRP35414 380 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 GDI2P50395 445 aaKnown RBP6.51□□□□□ -1.37
YBX3-204ENST00000366290 ERVS71-1P61550 626 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 TMEM249Q2WGJ8 235 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 LRRN1Q6UXK5 716 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 UNQ6126/PRO20091Q6UXV3 157 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 RFPL4BQ6ZWI9 263 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 KRT74Q7RTS7 529 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 NAA40Q86UY6 237 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 GLCCI1Q86VQ1 547 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 LRP11Q86VZ4 500 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 ZNF786Q8N393 782 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 ZNF114Q8NC26 417 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 OR52I1Q8NGK6 324 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 OR2AJ1Q8NGZ0 328 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 SPATA3Q8NHX4 192 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 THEM6Q8WUY1 208 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 Q96MT0 163 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 OR8B4Q96RC9 309 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 TBX5Q99593 518 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 ATF6BQ99941 703 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 TTTY10Q9BZA0 68 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 CDH20Q9HBT6 801 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 FGF20Q9NP95 211 aaPredicted RBP6.51□□□□□ -1.37
YBX3-204ENST00000366290 TUBG2Q9NRH3 451 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 PLCXD1Q9NUJ7 323 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 FKBP14Q9NWM8 211 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 SLCO1C1Q9NYB5 712 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 UBAP1Q9NZ09 502 aa6.51□□□□□ -1.37
YBX3-204ENST00000366290 MYEF2Q9P2K5 600 aaKnown RBP6.51□□□□□ -1.37
YBX3-204ENST00000366290 MRM2Q9UI43 246 aaKnown RBP6.51□□□□□ -1.37
YBX3-204ENST00000366290 F5H5K5 113 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 M0R135 149 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 SLC1A7O00341 560 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 DENRO43583 198 aaKnown RBP6.5□□□□□ -1.37
YBX3-204ENST00000366290 SRSF10O75494 262 aaKnown RBP6.5□□□□□ -1.37
YBX3-204ENST00000366290 KDM4BO94953 1096 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 TACSTD2P09758 323 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 OR2T7P0C7T2 308 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 DAOP14920 347 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 CCNOP22674 350 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 KLF3P57682 345 aaPredicted RBP6.5□□□□□ -1.37
YBX3-204ENST00000366290 CXCR4P61073 352 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 RAB40BQ12829 278 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 ECH1Q13011 328 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 MOGQ16653 247 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 SNAI3Q3KNW1 292 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 IGSF11Q5DX21 431 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 FAM122CQ6P4D5 195 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 ZNF322Q6U7Q0 402 aaPredicted RBP6.5□□□□□ -1.37
YBX3-204ENST00000366290 ZCCHC24Q8N2G6 241 aaKnown RBP6.5□□□□□ -1.37
YBX3-204ENST00000366290 MAPK1IP1LQ8NDC0 245 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 OR10H4Q8NGA5 316 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 OR2T27Q8NH04 317 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 SYNPRQ8TBG9 265 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 GGHQ92820 318 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 ZNF799Q96GE5 643 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 C4orf45Q96LM5 186 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 CNBD2Q96M20 576 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 OR51B6Q9H340 312 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 DYNLRB1Q9NP97 96 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 CENPMQ9NSP4 180 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 PAK1IP1Q9NWT1 392 aaPredicted RBP6.5□□□□□ -1.37
YBX3-204ENST00000366290 ZNF319Q9P2F9 582 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 PSORS1C1Q9UIG5 152 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 LAMP5Q9UJQ1 280 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 RPL36Q9Y3U8 105 aaKnown RBP6.5□□□□□ -1.37
YBX3-204ENST00000366290 LRP12Q9Y561 859 aa6.5□□□□□ -1.37
YBX3-204ENST00000366290 TANC2Q9HCD6 1990 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 IGLV5-37A0A075B6J1 123 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 IGHV4-61A0A0C4DH41 118 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 SNTNA6NMZ2 147 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 ZNF670-ZNF695F2Z2N8 137 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 CRLF1O75462 422 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 RP2O75695 350 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 CLPTM1O96005 669 aa6.49□□□□□ -1.37
YBX3-204ENST00000366290 PNPP00491 289 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms