RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 OR10K2Q6IF99 312 aa9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 CCBE1Q6UXH8 406 aaPredicted RBP9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 UNQ6126/PRO20091Q6UXV3 157 aa9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 FBXW12Q6X9E4 464 aa9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 ASCL4Q6XD76 172 aa9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 NRARPQ7Z6K4 114 aa9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 C1orf174Q8IYL3 243 aa9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 ZNF101Q8IZC7 436 aa9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 ZNF525Q8N782 197 aa9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 C3orf56Q8N813 242 aa9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 DUSP18Q8NEJ0 188 aa9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 OR56B2PQ8NGI1 322 aa9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 OR52I2Q8NH67 350 aa9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 FCAMRQ8WWV6 532 aa9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 DEDD2Q8WXF8 326 aa9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 PIGCQ92535 297 aa9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 FAM168AQ92567 244 aa9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 S100PBPQ96BU1 408 aa9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 BORCS8Q96FH0 119 aa9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 CST11Q9H112 138 aa9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 NGBQ9NPG2 151 aa9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 RBFOX1Q9NWB1 397 aaKnown RBP9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 SLC25A15Q9Y619 301 aa9.55□□□□□ -0.88
CSNK1E-202ENST00000366216 NBEAL2Q6ZNJ1 2754 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 TRAV18A0A075B6X5 111 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 LINC00854A0A1B0GVQ3 168 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 A0A1W2PR80 420 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 CD300LBA8K4G0 201 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 RAB27BO00194 218 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 KDM4BO94953 1096 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 CD3GP09693 182 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 GSTT2BP0CG30 244 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 ZNF35P13682 527 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 GDNFP39905 211 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 ATP1B3P54709 279 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 MTCP1P56278 107 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 AP3S2P59780 193 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 SSBP1Q04837 148 aaKnown RBP9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 BSPH1Q075Z2 132 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 KLF9Q13886 244 aaPredicted RBP9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 PLCXD3Q63HM9 321 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 RFPL4BQ6ZWI9 263 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 MOB3CQ70IA8 216 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 MYPOPQ86VE0 399 aaPredicted RBP9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 TOMM5Q8N4H5 51 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 STEAP2Q8NFT2 490 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 C10orf105Q8TEF2 133 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 NPRL2Q8WTW4 380 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 TNFAIP8L1Q8WVP5 186 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 MSI2Q96DH6 328 aaKnown RBP9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 URM1Q9BTM9 101 aaKnown RBP9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 CACNG6Q9BXT2 260 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 LPAR5Q9H1C0 372 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 POFUT1Q9H488 388 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 AUNIPQ9H7T9 357 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 SCPEP1Q9HB40 452 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 CISD1Q9NZ45 108 aaKnown RBP9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 ING4Q9UNL4 249 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 CACNG2Q9Y698 323 aa9.54□□□□□ -0.88
CSNK1E-202ENST00000366216 hCG_2014768A0A024R1R8 64 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 FAM230AA0A1W2PPH8 454 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 DPRXA6NFQ7 191 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 ZNF850A8MQ14 1090 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 CENPXA8MT69 81 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 H7C417 338 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 ORC5O43913 435 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 CDC14BO60729 498 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 ZNF780AO75290 641 aaPredicted RBP9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 MELTFP08582 738 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 FAM157BP0CG42 384 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 RAC2P15153 192 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 SELEP16581 610 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 PRSS3P35030 304 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 UCP2P55851 309 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 PPP1CBP62140 327 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 DEFA6Q01524 100 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 GPR176Q14439 515 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 HLXQ14774 488 aaPredicted RBP9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 CEACAM21Q3KPI0 293 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 AGAP6Q5VW22 663 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 ZDHHC23Q8IYP9 409 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 FAM89BQ8N5H3 189 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 ZSCAN4Q8NAM6 433 aaPredicted RBP9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 PXT1Q8NFP0 134 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 ENKURQ8TC29 256 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 GPX8Q8TED1 209 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 AQP3Q92482 292 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 S100A13Q99584 98 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 PAPOLGQ9BWT3 736 aaKnown RBP9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 TM2D1Q9BX74 207 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 TMEM59Q9BXS4 323 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 METTL9Q9H1A3 318 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 TAS2R8Q9NYW2 309 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 IL36GQ9NZH8 169 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 MYEF2Q9P2K5 600 aaKnown RBP9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 MTFP1Q9UDX5 166 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 MPC1Q9Y5U8 109 aa9.53□□□□□ -0.88
CSNK1E-202ENST00000366216 IGKV1-27A0A075B6S5 117 aa9.52□□□□□ -0.89
CSNK1E-202ENST00000366216 IGHV1-18A0A0C4DH31 117 aa9.52□□□□□ -0.89
CSNK1E-202ENST00000366216 FAM240BA0A1B0GVZ2 78 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms