RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 ZNF799Q96GE5 643 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 C7orf34Q96L11 122 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 CCL13Q99616 98 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 KCTD14Q9BQ13 255 aaPredicted RBP4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 SIRT7Q9NRC8 400 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 MRPL22Q9NWU5 206 aaKnown RBP4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 ONECUT1Q9UBC0 465 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 DUX4Q9UBX2 424 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 CYB5R1Q9UHQ9 305 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 RPUSD1Q9UJJ7 312 aaKnown RBP4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 HSF4Q9ULV5 492 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 AP3M1Q9Y2T2 418 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 NOP16Q9Y3C1 178 aaKnown RBP4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 FAM96BQ9Y3D0 163 aa4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 PRKDCP78527 4128 aaKnown RBP4.22□□□□□ -1.73
RNU4-4P-201ENST00000364588 ZNF816-ZNF321PA0A0X1KG74 233 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 BTBD17A6NE02 478 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 TEX22C9J3V5 150 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 NPIPB11E5RHQ5 1161 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 BHLHE40O14503 412 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 ARPC3O15145 178 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 NDUFA2O43678 99 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 GADD45GO95257 159 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 PTBP3O95758 552 aaKnown RBP4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 PRB2P02812 416 aaPredicted RBP4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 TFF1P04155 84 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 SPARCP09486 303 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 SELLP14151 372 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 ZNF823P16415 610 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 GMFBP60983 142 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 VAMP2P63027 116 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 CSNK2BP67870 215 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 KLRD1Q13241 179 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 TAF13Q15543 124 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 PCK2Q16822 640 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 CDONQ4KMG0 1287 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 WDR38Q5JTN6 314 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 GFI1BQ5VTD9 330 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 DHRS7BQ6IAN0 325 aaPredicted RBP4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 GLYATQ6IB77 296 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 GDPGP1Q6ZNW5 385 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 DCXRQ7Z4W1 244 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 WDR86Q86TI4 376 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 PNKDQ8N490 385 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 RNF148Q8N7C7 305 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 FAM216BQ8N7L0 139 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 ZSCAN4Q8NAM6 433 aaPredicted RBP4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 PROKR2Q8NFJ6 384 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 OR5T2Q8NGG2 359 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 OR51L1Q8NGJ5 315 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 OR9Q1Q8NGQ5 310 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 OR8S1Q8NH09 359 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 LRRC29Q8WV35 223 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 ZNRF4Q8WWF5 429 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 H1FXQ92522 213 aaKnown RBP4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 SPTSSAQ969W0 71 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 HOPXQ9BPY8 73 aaPredicted RBP4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 FUZQ9BT04 418 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 COPS4Q9BT78 406 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 SLC22A4Q9H015 551 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 DPAGT1Q9H3H5 408 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 EGLN3Q9H6Z9 239 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 PPP1R3EQ9H7J1 279 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 CENPMQ9NSP4 180 aa4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 MRPL15Q9P015 296 aaKnown RBP4.21□□□□□ -1.74
RNU4-4P-201ENST00000364588 IGHV4OR15-8A0A075B7B6 117 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 A0A1B0GVI7 797 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 ANKRD61A6NGH8 418 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 ANKRD30BLA7E2S9 258 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 G3V4G9 280 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 RNASEK-C17orf49H0YIS7 233 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 NPFFO15130 113 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 SLC22A2O15244 555 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 PLXNB1O43157 2135 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 NDUFB3O43676 98 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 GMNNO75496 209 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 ECDO95905 644 aaPredicted RBP4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 PAHP00439 452 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 LHBP01229 141 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 GYPBP06028 91 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 FBP1P09467 338 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 EEF1B2P24534 225 aaKnown RBP4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 OTX1P32242 354 aaPredicted RBP4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 GSSP48637 474 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 KRTAP10-6P60371 365 aaPredicted RBP4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 PSME3P61289 254 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 MICBQ29980 383 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 C2orf68Q2NKX9 166 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 TEX36Q5VZQ5 186 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 DRAM2Q6UX65 266 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 GSG1LQ6UXU4 331 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 SLC16A9Q7RTY1 509 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 DPY19L4Q7Z388 723 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 CPOQ8IVL8 374 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 ZDHHC21Q8IVQ6 265 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 C11orf53Q8IXP5 236 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 SPERTQ8NA61 448 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 POC1AQ8NBT0 407 aa4.2□□□□□ -1.74
RNU4-4P-201ENST00000364588 SLAMF6Q96DU3 332 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms