RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 DTX4Q9Y2E6 619 aa14.14□□□□□ -0.15
CLSTN1-201ENST00000361311 UBE2L5PA0A1B0GUS4 154 aa14.14□□□□□ -0.15
CLSTN1-201ENST00000361311 SHISA8B8ZZ34 492 aa14.14□□□□□ -0.15
CLSTN1-201ENST00000361311 ZNF217O75362 1048 aa14.14□□□□□ -0.15
CLSTN1-201ENST00000361311 CT45A8P0DMV1 189 aa14.14□□□□□ -0.15
CLSTN1-201ENST00000361311 CT45A9P0DMV2 189 aa14.14□□□□□ -0.15
CLSTN1-201ENST00000361311 ANKRD55Q3KP44 614 aa14.14□□□□□ -0.15
CLSTN1-201ENST00000361311 CT45A2Q5DJT8 189 aa14.14□□□□□ -0.15
CLSTN1-201ENST00000361311 BHLHE23Q8NDY6 225 aa14.14□□□□□ -0.15
CLSTN1-201ENST00000361311 MRGPRX4Q96LA9 322 aa14.14□□□□□ -0.15
CLSTN1-201ENST00000361311 HSF4Q9ULV5 492 aa14.14□□□□□ -0.15
CLSTN1-201ENST00000361311 DHRS3O75911 302 aa14.14□□□□□ -0.15
CLSTN1-201ENST00000361311 CCKARP32238 428 aa14.14□□□□□ -0.15
CLSTN1-201ENST00000361311 COTL1Q14019 142 aa14.14□□□□□ -0.15
CLSTN1-201ENST00000361311 OR2T10Q8NGZ9 312 aa14.14□□□□□ -0.15
CLSTN1-201ENST00000361311 NOL4LQ96MY1 436 aaPredicted RBP14.14□□□□□ -0.15
CLSTN1-201ENST00000361311 ZNF576Q9H609 170 aa14.14□□□□□ -0.15
CLSTN1-201ENST00000361311 DOCK3Q8IZD9 2030 aa14.14□□□□□ -0.15
CLSTN1-201ENST00000361311 ANKRD36A6QL64 1941 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 DHHO43323 396 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 ZNF737O75373 536 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 CHRNA7P36544 502 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 LY6G6FQ5SQ64 297 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 C1orf100Q5SVJ3 147 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 FGF14Q92915 247 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 UTP23Q9BRU9 249 aaKnown RBP14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 FAM60AQ9NP50 221 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 ZIC2O95409 532 aaPredicted RBP14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 CTGFP29279 349 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 GFERP55789 205 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 UBE2G2P60604 165 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 AQP3Q92482 292 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 TAAR9Q96RI9 348 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 Q9N2K0 584 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 TP53BP1Q12888 1972 aaPredicted RBP14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 SRSF3P84103 164 aaKnown RBP14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 REC114Q7Z4M0 266 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 PPP1R3BQ86XI6 285 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 FOXQ1Q9C009 403 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 LMAN1LQ9HAT1 526 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 SLC2A9Q9NRM0 540 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 SLC2A8Q9NY64 477 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 FKBP11Q9NYL4 201 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 DEDDO75618 318 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 IL24Q13007 206 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 MYBPHQ13203 477 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 TMEM183BQ1AE95 376 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 LHX8Q68G74 356 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 OR13G1Q8NGZ3 307 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 EXTL1Q92935 676 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 PRSS50Q9UI38 385 aa14.13□□□□□ -0.15
CLSTN1-201ENST00000361311 LAMTOR5O43504 91 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 ASAH2BP0C7U1 165 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 KLK2P20151 261 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 CAPZBP47756 277 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 HNRNPA3P51991 378 aaKnown RBP14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 CARD18P57730 90 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 UBE2NP61088 152 aaKnown RBP14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 INSM1Q01101 510 aaPredicted RBP14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 CLN3Q13286 438 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 SLC10A1Q14973 349 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 SFTPA1Q8IWL2 248 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 GCNT2Q8N0V5 402 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 RAB40CQ96S21 281 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 ESRP2Q9H6T0 727 aaKnown RBP14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 NAT8Q9UHE5 227 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 PTRH2Q9Y3E5 179 aaKnown RBP14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 ANKUB1A6NFN9 424 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 H0YL77 283 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 RNF224P0DH78 156 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 RPS4Y1P22090 263 aaKnown RBP14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 FKBP2P26885 142 aaKnown RBP14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 PPP1CAP62136 330 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 SHHQ15465 462 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 ZNF880Q6PDB4 577 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 ANKRD33Q7Z3H0 272 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 KLHDC1Q8N7A1 406 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 RNF133Q8WVZ7 376 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 NANOS1Q8WY41 292 aaKnown RBP14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 BSCL2Q96G97 398 aaPredicted RBP14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 C5orf66Q9H5L9 145 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 CABIN1Q9Y6J0 2220 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 J3QRE1 110 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 PPP1CCP36873 323 aaKnown RBP14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 MGAT2Q10469 447 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 GAMTQ14353 236 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 LBHQ53QV2 105 aaPredicted RBP14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 TMEM196Q5HYL7 178 aa14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 LSRQ86X29 649 aaPredicted RBP14.12□□□□□ -0.15
CLSTN1-201ENST00000361311 TERTO14746 1132 aaKnown RBP14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 LTC4SQ16873 150 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 OR2AE1Q8NHA4 323 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 ADGRG7Q96K78 797 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 CTDSP1Q9GZU7 261 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 LPAR5Q9H1C0 372 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 CACFD1Q9UGQ2 172 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 FUT9Q9Y231 359 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 A0A1W2PP11 408 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 SCRG1O75711 98 aa14.11□□□□□ -0.15
CLSTN1-201ENST00000361311 BGLAPP02818 100 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms